New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 984482	56 (0.950)	3 (0.050)	3/250	NT	5.1%	coding (398/1146 nt)	rlmN	23S rRNA (adenine(2503)‑C(2))‑methyltransferase RlmN
	?	NC_002947	= 984517	57 (1.000)					coding (433/1146 nt)	rlmN	23S rRNA (adenine(2503)‑C(2))‑methyltransferase RlmN

GACCGTCTATATTCCAACCGACGACCGCGGCACCCTGTGCGTATCGTCGCAAGCCGGCTGTGCCTTGGACTGCAGCTTCTGCTCCACCGGCAAGCAAGGCTTCAACAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/984372‑984482 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaGCCACACCTGGCCGATCACTTCGGCGGCAGTGAGGTTGCTGTTGAA  <  NC_002947/984517‑984472                                                                                                                                                               GACCGTCTATATTCCAACCGACGACCGCGGCACCCTGTGCGTATCGTCGCAAGCCGGCTGTGCCTTGGACTGCAGCTTCTGCTCCACCGGCAAGCAAGGCTTCAACAGCAAGCCACACCTGGCCGATCACTTCGGCGGCAGTGAGGTTG          <  4:210644/149‑1                        ACCGCGGCACCCTGTGCGTATCGTCGCAAGCCGGCTGTGCCTTGGACTGCAGCTTCTGCTCCACCGGCAAGCAAGGCTTCAACAGCAAGCCACACCTGGCCGATCACTTCGGCGGCAGTGAGGTTGCTGTTGAA  >  5:115838/1‑134                        ACCGCGGCACCCTGTGCGTATCGTCGCAAGCCGGCTGTGCCTTGGACTGCAGCTTCTGCTCCACCGGCAAGCAAGGCTTCAACAGCAAGCCACACCTGGCCGATCACTTCGGCGGCAGTGAGGTTGCTGTTGAA  <  6:115838/134‑1                                                                                                                                                               GACCGTCTATATTCCAACCGACGACCGCGGCACCCTGTGCGTATCGTCGCAAGCCGGCTGTGCCTTGGACTGCAGCTTCTGCTCCACCGGCAAGCAAGGCTTCAACAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/984372‑984482 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaGCCACACCTGGCCGATCACTTCGGCGGCAGTGAGGTTGCTGTTGAA  <  NC_002947/984517‑984472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.