New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1338700	63 (1.070)	4 (0.070)	4/244	NT	6.4%	coding (1416/2037 nt)	PP_1163	FAD‑binding oxidoreductase
	?	NC_002947	= 1338742	58 (1.040)					coding (1458/2037 nt)	PP_1163	FAD‑binding oxidoreductase

CGATGGGCAGCTTCACGCTTGACCAGCAAAGCACGCGCCCGTTGGTGCTGATCGGCGCGGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1338546‑1338700 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcctgTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCCAGGCTGCGT  <  NC_002947/1338742‑1338691                                                                                                                                                                                                                 CGATGGGCAGCTTCACGCTTGACCAGCAAAGCACGCGCCCGTTGGTGCTGATCGGCGCGGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGC                                                            <  1:354654/149‑1                            AAAGCACGCGCCCGTTGGTGCTGATCGGCGCGGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACACAGCCTGTTGCCGCAAGGCCGCCAGTTC                                 >  8:18877/1‑149                                                           GGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACACAGCCTGTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCCAGGCTGCGT  <  7:18877/149‑1                                                                     ATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCC           <  1:68265/130‑1                                                                     ATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCC           >  2:68265/1‑130                                                                                                                                                                                                                 CGATGGGCAGCTTCACGCTTGACCAGCAAAGCACGCGCCCGTTGGTGCTGATCGGCGCGGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1338546‑1338700 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcctgTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCCAGGCTGCGT  <  NC_002947/1338742‑1338691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.