| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1426800 = | NA (NA) | 9 (0.160) | 5/252 | NT | NA | coding (698/1422 nt) | PP_1250 | group II intron‑encoding maturase |
| ? | NC_002947 | 1426860 = | NA (NA) | coding (758/1422 nt) | PP_1250 | group II intron‑encoding maturase | |||||
CTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1426950‑1426800‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT > NC_002947/1426860‑1427007 CTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAAGGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTTGGCTGAC < 2:24131/149‑1CTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC < 8:49717/149‑1 CGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGA < 4:19203/148‑1 GCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC < 4:211464/131‑1 GCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC > 3:211464/1‑131 CAGGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATC > 6:250620/1‑148 GGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTAT < 5:250620/149‑1 GGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGCCCGCGAGCTGGCGCGGCGGGGCCATCGCTTCGTACGGTATGCCGATGATGCGACCATCTAT > 1:151983/1‑149 GGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTAT > 4:287843/1‑149 GGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTAT > 6:153374/1‑149 TATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTA > 1:329607/1‑149 ATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTAC > 3:190975/1‑149 CTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTG < 5:153374/149‑1 TGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGA < 2:329607/149‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTC > 5:213306/1‑149 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTC < 5:37184/149‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTC > 2:52198/1‑149 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTC > 5:16099/1‑149 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTC > 2:314903/1‑149 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGT < 5:147995/148‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGT < 1:3314/148‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGT > 2:3314/1‑148 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGT < 6:300446/148‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGAGCTTCCTGAGAGAACGTC > 5:303325/1‑149 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGACAGCGTCGAGCGCTTCCTGAGAGAACGT < 1:209137/148‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACCATAAGACGATGATGCGAACATCAATCTACGCAGTCCCCGGGCCGGCGAACGGGTGTAGGTCAGCTTCGAGAGCTTCCAGAGAGAACGTC > 6:354118/1‑149 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTC < 7:330703/55‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTC > 8:330703/1‑55 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGCAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGT < 8:179366/148‑1 AATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT > 4:365842/1‑149 AATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT < 1:356871/149‑1 AATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT > 3:259186/1‑149 AATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGACGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCTTCGAGCGCTTACTGAGAGAACGTCT > 2:310725/1‑149 CTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1426950‑1426800‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT > NC_002947/1426860‑1427007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |