New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1650401 =	51 (0.870)	6 (0.110)	4/244	NT	11.5%	coding (659/2043 nt)	PP_1446	TonB‑dependent receptor
	?	NC_002947	1650448 =	44 (0.790)					coding (612/2043 nt)	PP_1446	TonB‑dependent receptor

GCCGACACCACTCGCAGCAGCGCCGGCAAGCTGGAGGCCGGCGACGGCGCCTTCGCCCTGCACCTGGATGCCAACAGCCGCCAGTTCAACGACCTGCGCATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1650549‑1650401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccggGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGCGCCGCCGTAACGCAGTTCACCGGCACCGTGGATGCCCTCGATCGGC  >  NC_002947/1650448‑1650595                                                                                                                                                                                                                                                                                                           GCCGACACCACTCGCAGCAGCGCCGGCAAGCTGGAGGCCGGCGACGGCGCCTTCGCCCTGCACCTGGATGCCAACAGCCGCCAGTTCAACGACCTGCGCATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGG                                                                                                                                                      <  1:163273/149‑1                                                                        CAACAGCCGCCAGTTCAACGACCTGCGCATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGA                                                                                                                                                            >  3:63529/1‑72                                                                        CAACAGCCGCCAGTTCAACGACCTGCGCATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGA                                                                                                                                                            <  4:63529/72‑1                                                                                                    ATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAG                                                                                                         >  7:111744/1‑95                                                                                                    ATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAG                                                                                                         <  8:111744/95‑1                                                                                                    ATCCCGGGCTATGCACGCAGCGCCAAGGTGCG‑‑‑TGC‑‑A‑TAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTG                                                        >  5:364296/1‑138                                                                                                    ATCCCGGGCTATGCACGCAGCGCCAAGGTGCG‑‑‑TGC‑‑A‑TAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTG                                                        <  6:364296/138‑1                                                                                                     TCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCG                                                  >  6:301427/1‑149                                                                                                                     CAGCGCCAAGGTGCGCGATGCCGACGAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGCGCCGCCGTAACGCA                                  <  5:301427/149‑1                                                                                                                                                 CCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGCGCCGCCGTAACGCAGTTCACCGGCACCGTGGATGCCCTCGAT      >  3:238888/1‑149                                                                                                                                                     GGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCTAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGCGCCGCCGTAACGCAGTTCACCGGCACCGTGGATGCCCTCGATCGGC  <  2:255111/149‑1                                                                                                                                                                                                                                                                                                           GCCGACACCACTCGCAGCAGCGCCGGCAAGCTGGAGGCCGGCGACGGCGCCTTCGCCCTGCACCTGGATGCCAACAGCCGCCAGTTCAACGACCTGCGCATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1650549‑1650401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccggGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGCGCCGCCGTAACGCAGTTCACCGGCACCGTGGATGCCCTCGATCGGC  >  NC_002947/1650448‑1650595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.