New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1722035 | 67 (1.140) | 4 (0.070) | 4/250 | NT | 6.5% | coding (668/3066 nt) | PP_1517 | RND family transporter |
? | NC_002947 | = 1722076 | 51 (0.890) | coding (709/3066 nt) | PP_1517 | RND family transporter |
ATGTGGGCAAGGTCGATCTGATCGGCCTGCAGGACGAGAAAGTCTGGATCGAGCTGTCCAACCTCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1721885‑1722035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTCGAAGAAACCGGCGGTGCTCACCGCGTTCTGCTCTTGCAACGCCTTCTGCACGGCTTCCAGCGGCACGCCGAGGGTGGCCAGCTTGAGGTTGGACAGCTCGATCCA < NC_002947/1722076‑1721929 ATGTGGGCAAGGTCGATCTGATCGGACTGCAGGACGAGAAAGTCTGGATCGAGCTGTCCAACCTCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTC < 4:278482/149‑1 GGCAAGGTCGATCTGATCGGCCTGCAGGACGAGAAAGTCTGGATCGAGCTGTCCAACCTCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTCGA < 3:156667/146‑1 GGCAAGGTCGATCTGATCGGCCTGCAGGACGAGAAAGTCTGGATCGAGCTGTCCAACCTCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTCGA > 4:156667/1‑146 GCCTGCAGGACGAGAAAGTCTGGATCGAGCTGTCCAACCTCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTCGAAACGCCCGCTCACGCGCAGTTG > 3:323874/1‑149 GATCGAGCTGTCCAACCTCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTCGAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTC < 4:323874/148‑1 GATCGAGCTGTCCAACCTCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAACCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTC > 6:87112/1‑103 TCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTCGAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCG < 3:71524/120‑1 TCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTCGAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCG > 4:71524/1‑120 GAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTCGAAGAAACCGGCGGTGCTCACCGCGTTCTGCTCTTGCAACGCCTTCTGCACGGCTTCCTGCGGCACGCCGAGGGTGGCCAGCTTGAGGTTGGACAGCTCGATCC < 1:249161/149‑1 GAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTCGAAGAAACCGGCGGTGCTCACCGCGTTCTGCTCTTGCAACGCCTTCTGCACGGCTTCCAGCGGCACGCCGAGGGTGGCCAGCTTGAGGTTGGACAGCTCGATC > 1:121479/1‑148 AAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTCGAAGAAACCGGCGGTGCTCACCGCGTTCTGCTCTTGCAACGCCTTCTGCACGGCTTCCAGCGGCACGCCGAGGGTGGCCAGCTTGAGGTTGGACAGCTCGATCCA > 4:144068/1‑149 AAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTCGAAGAAACCGGCGGTGCTCACCGCGTTCTGCTCTTGCAACGCCTTCTGCACGGCTTCCAGCGGCACGCCGAGGGTGGCCAGCTTGAGGTTGGACAGCTCGATC > 3:84400/1‑147 ATGTGGGCAAGGTCGATCTGATCGGCCTGCAGGACGAGAAAGTCTGGATCGAGCTGTCCAACCTCAAGCTGGCCACCCTCGGCGTGCCGCTGGAAGCCGTGCAGAAGGCGTTGCAAGAGCAGAACGCGGTGAGCACCGCCGGTTTCTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1721885‑1722035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTCGAAGAAACCGGCGGTGCTCACCGCGTTCTGCTCTTGCAACGCCTTCTGCACGGCTTCCAGCGGCACGCCGAGGGTGGCCAGCTTGAGGTTGGACAGCTCGATCCA < NC_002947/1722076‑1721929 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |