| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1751753 = | 58 (0.990) | 5 (0.090) | 4/248 | NT | 7.8% | coding (160/705 nt) | PP_1552 | replication protein |
| ? | NC_002947 | 1751835 = | 62 (1.100) | coding (242/705 nt) | PP_1552 | replication protein | |||||
CCCAGGTGGGTCTTGCCGGTGCCGACCCTGCCCAGCAGCATCAGGCAACGCCCGGTGCGCTCGATCTCCTCGAACGCGGCCACGTAACGCGTGCAGTAGGCCAGGGCCTTGCGCTGGCCTTCGTGCTCGACACGGTAGTTGGCCAGGGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1751904‑1751753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgAGGAGATCGAGCGCACCGGGCGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGACCCACCTGGGCGCCGGTATGGCCAACGAGCTGATGCGCAACACCTCGGCTACCGCCGTGTACCGCACGGTGGGCGCTGTCCTGCA > NC_002947/1751835‑1751979 CCCAGGTGGGTCTTGCCGGTGCCGACCCTGCCCAGCAGCATCAGGCAACGCCCGGTGCGCTCGATCTCCTCGAACGCGGCCACGTAACGCGTGCAGTAGGCCAGGGCCTTGCGCTGGCCTTCGTGCTCGACACGGTAGTTGGCCAGGGT < 8:1082/149‑1 CTCGAACGCGGCCACGTAACGCGTGCAGTAGGCCAGGGCCTTGCGCTGGCCTTCGTGCTCGACACGGTAGTTGGCCAGGGTTCGAGGAGATCGAGCGCACCGGGCGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGCCCCAC > 3:312095/1‑149 CTCGAACGCGGCCACGTAACGCGTGCAGTAGGCCAGGGCCTTGCGCTGGCCTTCGTGCTCGACACGGTAGTTGGCCAGGGTTCGAGGAGATCGAGCGCACCGGGCGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGACCC < 5:117404/147‑1 CTCGAACGCGGCCACGTAACGCGTGCAGTAGGCAAGGGCCTTGCGCTGGCCTTCGTGCTCGACACGGTAGTTGGCCAGGGTTCGAGGAGATCGAGCGCACCGGGCGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGACCC > 6:117404/1‑147 TCGAACGCGGCCACGTAACGCGTGCAGTAGGCCAGGGCCTTGCGCTGGCCTTCGTGCTCGACACGGTAGTTGGCCAGGGTTCGAGGAGATCGAGCGCACCGGGCGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGACCCACC > 4:285703/1‑149 CAGTAGGCCAGGGCCTTGCGCTGGCCTTCGTGCTCGACACGGTAGTTGGCCAGGGTTCGAGGAGATCGAGCGCACCGGGCGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGACCCACCTGGGCGCCGGTATGGCCAACGAGC < 3:285703/149‑1 TTCGAGGAGATCGAGCGCACCGGGCGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGACCCACCTGGGCGCCGGTATGGCCAACGAGCTGATGCGCAACACCTCGGCTACCGCCGTGTACCGCACGGTGGGCGCTGTCCTGCA < 2:162121/149‑1 TTCGAGGAGATCGAGCGCACCGGGAGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGACCCACCTGGGCGCCGGTATGGCCAACGAGCTGATGCGCAACACCTCGGCTACCGCCGTGTACCGCACGGTGGGCGCTGTCCTGCA < 3:223702/149‑1 CCCAGGTGGGTCTTGCCGGTGCCGACCCTGCCCAGCAGCATCAGGCAACGCCCGGTGCGCTCGATCTCCTCGAACGCGGCCACGTAACGCGTGCAGTAGGCCAGGGCCTTGCGCTGGCCTTCGTGCTCGACACGGTAGTTGGCCAGGGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1751904‑1751753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgAGGAGATCGAGCGCACCGGGCGTTGCCTGATGCTGCTGGGCAGGGTCGGCACCGGCAAGACCCACCTGGGCGCCGGTATGGCCAACGAGCTGATGCGCAACACCTCGGCTACCGCCGTGTACCGCACGGTGGGCGCTGTCCTGCA > NC_002947/1751835‑1751979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |