New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1792213	59 (1.000)	4 (0.070)	3/246	NT	6.6%	coding (863/1359 nt)	rseP	regulatory intramembrane protein RIP
	?	NC_002947	= 1792243	57 (1.020)					coding (893/1359 nt)	rseP	regulatory intramembrane protein RIP

CTGCCGCTGCGGGCCTGAAAACCGGTGACAAGCTGCTGGCTCTGGATGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1792060‑1792213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actgccTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGC  <  NC_002947/1792243‑1792098                                                                                                                                                                                                                                                                                                              CTGCCGCTGCGGGCCTGAAAACCGGTGACAAGCTGCTGGCTCTGGATGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAA                                                                                                                                                         >  7:314855/1‑149      GCTGCGGGCCTGAAAACCGGTGACAAGCTGCTGGCTCTGGATGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTCCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTGCC                                                                                                                                                    >  1:148715/1‑149                                               TGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTGCCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAG                                                                                                           <  5:170779/149‑1                                               TGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTGCCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAG                                                                                                           <  8:319322/149‑1                                                            ACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTGCCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCA                                                                                                                  <  3:195222/129‑1                                                            ACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTGCCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCA                                                                                                                  >  4:195222/1‑129                                                                                                                                                         CCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGC  <  8:61147/148‑1                                                                                                                                                          CTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGC  >  3:171783/1‑147                                                                                                                                                                                                                                                                                                              CTGCCGCTGCGGGCCTGAAAACCGGTGACAAGCTGCTGGCTCTGGATGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1792060‑1792213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actgccTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGC  <  NC_002947/1792243‑1792098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.