New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1878286 =	63 (1.070)	4 (0.070)	4/244	NT	6.7%	coding (408/1221 nt)	PP_1684	transporter
	?	NC_002947	1878342 =	52 (0.930)					coding (464/1221 nt)	PP_1684	transporter

GGCACGATGAACGCCACCAAAAGGCCCAGTACCAGCAACGCTGCCGACCAGCCCAGCCACTGAATCAGGCCTTGGGTGCCCGGCAACATGGCGAACTGGCCGAACGACCCGGCGGCGCTGGCGATCCCCATGGCCATGCTGCGCTTTTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1878438‑1878286 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggccAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGTGGCGTTCATCGTGCCTTTCGTCTGTCTGCTGCGCGATCGCCCGTTACCCAGTCACGGTGCCGAG  >  NC_002947/1878342‑1878487                                                                                                                                                                                                                                                                                                             GGCACGATGAACGCCACCAAAAGGCCCAGTACCAGCAACGCTGCCGACCAGCCCAGCCACTGAATCAGGCCTTGGGTGCCCGGCAACATGGCGAACTGGCCGAACGACCCGGCGGCGCTGGCGATCCCCATGGCCATGCTGCGCTTTTC                                                                                                                                                        <  1:73954/149‑1                                                                                              AACTGGCCGAACGACCCGGCGGCGCTGGCGATCCCCATGGCCATGCTGCGCTTTTCGGCCAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGT                                                                  >  5:9102/1‑142                                                                                              AACTGGCCGAACGACCCGGCGGCGCTGGCGATCCCCATGGCCATGCTGCGCTTTTCGGCCAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGT                                                                  <  6:9102/142‑1                                                                                               ACTGGCCGAACGACCCGGCGGCGCTGGCGATCCCCATGGCCATGCTGCGCTTTTCGGCCAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGTGGCGTT                                                            >  7:4163/1‑147                                                                                               ACTGGCCGAACGACCCGGCGGCGCTGGCGATCCCCATGGCCATGCTGCGCTTTTCGGCCAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGTGGCGTT                                                            <  8:4163/147‑1                                                                                                                                                   TTCGGCCAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGTGGCGTTCATCGTGCCTTTCGTCTGTCTGCTGCGCGATCGCCCGTTACCCAGTCACGGTGC      <  4:259264/149‑1                                                                                                                                                      GGCCAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGTGGCGTTCATCGTGCCTTTCGTCTGTCTGCTGCGCGATCGCCCGTTACCCAGTCACGGTGCCGA   <  5:270246/149‑1                                                                                                                                                       GCCAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGTGGCGTTCATCGTGCCTTTCGTCTGTCTGCTGCGCGATCGCCCGTTACCCAGTCACGGTGCCGAG  >  3:134018/1‑149                                                                                                                                                                                                                                                                                                             GGCACGATGAACGCCACCAAAAGGCCCAGTACCAGCAACGCTGCCGACCAGCCCAGCCACTGAATCAGGCCTTGGGTGCCCGGCAACATGGCGAACTGGCCGAACGACCCGGCGGCGCTGGCGATCCCCATGGCCATGCTGCGCTTTTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1878438‑1878286 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggccAGTTCGCCATGTTGCCGGGCACCCAAGGCCTGATTCAGTGGCTGGGCTGGTCGGCAGCGTTGCTGGTACTGGGCCTTTTGGTGGCGTTCATCGTGCCTTTCGTCTGTCTGCTGCGCGATCGCCCGTTACCCAGTCACGGTGCCGAG  >  NC_002947/1878342‑1878487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.