New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2059968 = | 57 (0.970) | 3 (0.050) | 3/240 | NT | 5.9% | coding (661/939 nt) | PP_1836 | ZIP family metal transporter |
? | NC_002947 | 2060019 = | 43 (0.790) | coding (610/939 nt) | PP_1836 | ZIP family metal transporter |
GTGGCTGTTTGTGCTGGCGATCACCCTGCACAACCTGCCTGAAGGCATGGCGATTGGCGTGAGCTTTGCCAATGGCGACATGAACATCGGCCTGCCGCTGACCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2060119‑2059968 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcactggTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTC > NC_002947/2060019‑2060166 GTGGCTGTTTGTGCTGGCGATCACCCTGCACAACCTGCCTGAAGGCATGGCGATTGGCGTGAGCTTTGCCAATGGCGACATGAACATCAGCCTGCCGCTGACCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCAC > 6:56413/1‑149 ACCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGG < 3:232928/130‑1 ACCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGG > 4:232928/1‑130 CAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCC > 4:23908/1‑149 CTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCT > 3:118723/1‑149 GTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTC < 6:160586/149‑1 GTGGCTGTTTGTGCTGGCGATCACCCTGCACAACCTGCCTGAAGGCATGGCGATTGGCGTGAGCTTTGCCAATGGCGACATGAACATCGGCCTGCCGCTGACCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2060119‑2059968 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcactggTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTC > NC_002947/2060019‑2060166 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |