New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2456170 = | 102 (1.730) | 6 (0.110) | 6/248 | NT | 5.5% | coding (885/1464 nt) | gapB | glyceraldehyde‑3‑phosphate dehydrogenase |
? | NC_002947 | 2456213 = | 110 (1.950) | coding (928/1464 nt) | gapB | glyceraldehyde‑3‑phosphate dehydrogenase |
GCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGTTGACGATGCCGTACTGGTCGTTGATGGCCTTGAGCACCGGCACGATGGCGTTGGTGGTGCAGGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2456322‑2456170 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGGCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCG > NC_002947/2456213‑2456360 GCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGTTGACGATGCCGTACTGGTCGTTGATGGCCTTGAGCACCGGCACGATGGCGTTGGTGGTGCAGGA < 5:203888/149‑1 GAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGTTGACGATGCCGTACTGGTCGTTGATGGCCTTGAGCACCGGCACGATGGCGTTGGTGGTGCAGGAGG < 5:247626/125‑1 GAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGTTGACGATGCCGTACTGGTCGTTGATGGCCTTGAGCACCGGCACGATGGCGTTGGTGGTGCAGGAGG > 6:247626/1‑125 GTTGATGGCCTTGAGCACCGGCACGATGGCGTTGGTGGTGCAGGAGGCCATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCC > 6:330357/1‑149 TTGATGGCCTTGAGCACCGGCACGATGGCGTTGGTGGTGCAGGAGGCCATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCG > 5:231590/1‑149 TTGAGCACCGGCACGATGGCGTTGGTGGTGCTCAAGGCCATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGG > 1:62383/1‑143 TTGAGCACCGGCACGATGGCGTTGGTGGTGCTCAAGGCCATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGG < 2:62383/143‑1 AGCACCGGCACGATGGCGTTGGTGGTGCAGGAGGCCATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGGCCGTGCCGC < 5:330357/149‑1 ATGGCGTTGGTGGTGCAGGAGGCCATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGGCCGTGCCGCGCCACTGAACAT < 6:231590/149‑1 GGCCATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGGCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCG > 2:74909/1‑149 GGCCATCAAATACCACTACGCCATAGTCAACGGCCACGACGAAACCGTTCACTCGTTCACCAACGACCACAACATGATCGACAACTTCCACAACGACACCCGCCGAGGCCGTGCCGCGCCACTGAACATGGTAATCACCTAAACCGACG > 8:93204/1‑149 CATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGGCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCG > 3:336538/1‑149 CATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGGCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCG > 3:341984/1‑149 GCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGTTGACGATGCCGTACTGGTCGTTGATGGCCTTGAGCACCGGCACGATGGCGTTGGTGGTGCAGGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2456322‑2456170 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccATCAACGACCAGTACGGCATCGTCAACGGCCACGTCGAAACCGTTCACTCGTTCACCAACGACCAGAACCTGATCGACAACTTCCACAAGGGCAGCCGCCGTGGCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCG > NC_002947/2456213‑2456360 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |