New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2468545 =	135 (2.290)	6 (0.110)	5/244	NT	5.1%	coding (378/564 nt)	PP_2162	phosphonoacetaldehyde phosphonohydrolase‑like protein
	?	NC_002947	2468600 =	96 (1.730)					coding (323/564 nt)	PP_2162	phosphonoacetaldehyde phosphonohydrolase‑like protein

GCGTGCGCTGGCCGGCGCCGAACGCTTGCTGGCAGGCACTGATGGCGCTGGACAGCGAGCGCCTGGATGGCTGCGTATTGGTCAGCGGCGACCCGCGCCTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2468699‑2468545 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcagcAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGCCAGCGCACGCCATTGACCGCATGCCCTGGCAGCCAGTCGGGCAGCACATGGGCCAG  >  NC_002947/2468600‑2468745                                                                                                                                                                                                                                                                                                               GCGTGCGCTGGCCGGCGCCGAACGCTTGCTGGCAGGCACTGATGGCGCTGGACAGCGAGCGCCTGGATGGCTGCGTATTGGTCAGCGGCGACCCGCGCCTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCC                                                                                                                                                          <  3:32899/149‑1   GTGCGCTGGCCGGCGCCGAACGCTTGCTGGCAGGCACTGATGGCGCTGGACAGCGAGCGCCTGGATGGCTGCGTATTGGTCAGCGGCGACCCGCGCCTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTG                                                                                                                                                        >  4:11448/1‑149   GTGCGCTGGCCGGCGCCGAACGCTTGCTGGCAGGCACTGATGGCGCTGGACAGCGAGCGCCTGGATGGCTGCGTATTGGTCAGCGGCGACCCGCGCCTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTG                                                                                                                                                        >  7:37817/1‑149      CGCTGGCCGGCGCCGAACGCTTGCTGGCAGGCACTGATGGCGCTGGACAGCGAGCGCCTGGATGGCTGCGTATTGGTCAGCGGCGACCCGCGCCTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCA                                                                                                                                                      <  2:294275/148‑1      CGCTGGCCGGCGCCGAACGCTTGCTGGCAGGCACTGATGGCGCTGGACAGCGAGCGCCTGGATGGCTGCGTATTGGTCAGCGGCGACCCGCGCCTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCA                                                                                                                                                      <  4:54187/148‑1       GCTGGCCGGCGCCGAACGCTTGCTGGCAGGCACTGATGGCGCTGGACAGCGAGCGCCTGGATGGCTGCGTATTGGTCAGCGGCGACCCGCGCCTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCAGC                                                                                                                                                    >  8:58112/1‑149                                                                                                   CTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCAGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGCCA                                                        <  2:279057/149‑1                                                                                                   CTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCAGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGC                                                          >  1:279057/1‑147                                                                                                   CTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCAGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCG                                                            <  3:225258/145‑1                                                                                                   CTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCAGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCG                                                            >  4:225258/1‑145                                                                                                      CTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCAGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGCCAGCG                                                     >  3:88865/1‑149                                                                                                              TGGCCTTAACGCCGGCTTGTGGACGGTAGGC‑‑‑‑CAGACTGCAGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCA                                                                             <  4:147831/113‑1                                                                                                                                                        CAGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGCCAGCGCACGCCATTGACCGCATGCCCTGGCAGCCAGTCGGGCAGCACATGGGC     >  2:45145/1‑147                                                                                                                                                         AGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGCCAGCGCACGCCATTGACCGCATGCCCTGGCAGCCAGTCGGGCAGCACATGGGCCAG  <  1:20604/149‑1                                                                                                                                                         AGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGCCAGCGCACGCCATTGACCGCATGCCCTGGCAGCCAGTCGGGCAGCACATGGGCCAG  <  1:294275/149‑1                                                                                                                                                         AGCAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGCCAGCGCACGCCATTGACCGCATGCCCTGGCAGCCAGTCGGGCAGCACATGGGCCAG  <  7:351922/149‑1                                                                                                                                                                                                                                                                                                               GCGTGCGCTGGCCGGCGCCGAACGCTTGCTGGCAGGCACTGATGGCGCTGGACAGCGAGCGCCTGGATGGCTGCGTATTGGTCAGCGGCGACCCGCGCCTGCTGCAGTCTGGCCTTAACGCCGGCTTGTGGACGGTAGGCCTGGCCGCCTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2468699‑2468545 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcagcAGGCGCGGGTCGCCGCTGACCAATACGCAGCCATCCAGGCGCTCGCTGTCCAGCGCCATCAGTGCCTGCCAGCAAGCGTTCGGCGCCGGCCAGCGCACGCCATTGACCGCATGCCCTGGCAGCCAGTCGGGCAGCACATGGGCCAG  >  NC_002947/2468600‑2468745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.