New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 2506455111 (1.890)6 (0.110) 5/244 NT 5.2% coding (1055/1107 nt) PP_2199 hypothetical protein
?NC_002947 = 2506475 116 (2.080)coding (1075/1107 nt) PP_2199 hypothetical protein

GACCGTGAACTGCCTGCGCTGTCGCCCAAGGACGATGCGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2506301‑2506455
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccgtaGCCGGCTCAGGGTGCGCTGGTACGGGAACGCCAGATACCCTTGAGTGTAGAGGGCATCGAGCGGCACCTGTGCCTCCAGGTACAACGCCACCCGGCGGTCATAGCATTCGTCGACCAGGGCAATGAAGCGGCGAACCGCATCGTCCT  <  NC_002947/2506475‑2506329
                                                                                                                                                                                                                                                                                                              
GACCGTGAACTGCCTGCGCTGTCGCCCAAGGACGATGCGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTT                                                                                                                                                           >  1:322019/1‑149
   CGTGAACTGCCTGCGCTGTCGCCCAAGGACGATGCGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCC                                                                                                                                                        <  1:333931/149‑1
   CGTGAACTGCCTGCGCTGTCGCCCAAGGACGATGCGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCC                                                                                                                                                        <  7:92432/149‑1
        ACTGCCTGCGCTGTCGCCCAAGGACGATGCGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCC                                                                                                                                                        >  5:291577/1‑144
        ACTGCCTGCGCTGTCGCCCAAGGACGATGCGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCC                                                                                                                                                        <  6:291577/144‑1
                                  ATGCGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAA                                                                                                                         <  1:344176/149‑1
                                     CGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAACGC                                                                                                                      <  4:360242/149‑1
                                                  CATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAA                                                                                                                         >  5:279472/1‑133
                                                  CATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAA                                                                                                                         <  6:279472/133‑1
                                                        CCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCTAGGGTATCTGGCGTTCCCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAAC                                                                                                                        <  8:245331/128‑1
                                                        CCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAAC                                                                                                                        >  7:245331/1‑128
                                                                                                                                                      CCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAACGCCAGATACCCTTGAGTGTAGAGGGCATCGAGCGGCACCTGTGCCTCCAGGTACAACGCCACCCGGCGGTCATAGCATTCGTCGACCAGGGCAATGAAGCGGCGAACCGCATCGT     <  2:17821/149‑1
                                                                                                                                                      CCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAACGCCAGATACCCTTGAGTGTAGAGGGCATCGAGCGGCACCTGTGCCTCCAGGTACAACGCCACCCGGCGGTCATAGCATTCGTCGACCAGGGCAATGAAGCGGCGAACCGCA         >  3:92452/1‑145
                                                                                                                                                      CCGTAGCCGGCTCAGGGTGCGCTGGTACGGGAACGCCAGATACCCTTGAGTGTAGAGGGCATCGAGCGGCACCTGTGCCTCCAGGTACAACGCCACCCGGCGGTCATAGCATTCGTCGACCAGGGCAATGAAGCGGCGAACCGCA         <  4:92452/145‑1
                                                                                                                                                         TAGCCGGCTCAGGGTGCGCTGGTACGGGAACGCCAGATACCCTTGAGTGTAGAGGGCATCGAGCGGCACCTGTGCCTCCAGGTACAACGCCACCCGGCGGTCATAGCATTCGTCGACCAGGGCAATGAAGCGGCGAACCGCATCGTCCT  >  2:322019/1‑149
                                                                                                                                                                                                                                                                                                              
GACCGTGAACTGCCTGCGCTGTCGCCCAAGGACGATGCGGTTCGCCGCTTCATTGCCCTGGTCGACGAATGCTATGACCGCCGGGTGGCGTTGTACCTGGAGGCACAGGTGCCGCTCGATGCCCTCTACACTCAAGGGTATCTGGCGTTCCCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2506301‑2506455
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccgtaGCCGGCTCAGGGTGCGCTGGTACGGGAACGCCAGATACCCTTGAGTGTAGAGGGCATCGAGCGGCACCTGTGCCTCCAGGTACAACGCCACCCGGCGGTCATAGCATTCGTCGACCAGGGCAATGAAGCGGCGAACCGCATCGTCCT  <  NC_002947/2506475‑2506329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.