New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2575962	47 (0.800)	3 (0.050)	3/244	NT	6.6%	coding (1139/1689 nt)	PP_2258	sensory box protein
	?	NC_002947	= 2576042	40 (0.720)					coding (1219/1689 nt)	PP_2258	sensory box protein

GGCAAGGTACTGGGCTTCGAGGGCTTATTGCGCTGGCAGCGGCCAGGCCGTGGTGTGGTGCCGCCAGGCGATT‑TCCTGCCCTGGGTAGAGCAGACCGACCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTTGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2575808‑2575962 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggcGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTGGCTCAACGCCTGCCCGATCACCCACTCGCCGATTTCGACGATCAGGTCGGTCTGCT  <  NC_002947/2576042‑2575896                                                                                                                                                                                                                                                                                                                  GGCAAGGTACTGGGCTTCGAGGGCTTATTGCGCTGGCAGCGGCCAGGCCGTGGTGTGGTGCCGCCAGGCGATT‑TCCTGCCCTGGGTAGAGCAGACCGACCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTT                                                                                                                                                            >  5:367536/1‑149    AAGGTACTGGGCTTCGAGGGCTTATTGCGCTGGCAGCGGCCAGGCCGTGGTGTGGTGCCGCCAGGCGATT‑TCCTGCCCTGGGTAGAGCAGACCGACCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTTGCA                                                                                                                                                         <  4:307786/149‑1       GTACTGGGCTTCGAGGGCTTATTGCGCTGGCAGCGGCCAGGCCGTGGTGTGGTGCCGCCAGGCGATTAAAGTGCCATGGGTAGAGCAGACCGACCTGATCGTCGAAAACGGCGATTGGTTGAACGGCAAGGCTTTGAGCCAGTTGCAGG                                                                                                                                                       >  1:114914/1‑149                                    GCAGCGGCCAGGCCGTGGTGTGGTGCCGCCAGGCGATT‑TCCTGCCCTGGGTAGAGCAGACCGACCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTTGCAG                                                                                                                                                        >  7:144845/1‑118                                    GCAGCGGCCAGGCCGTGGTGTGGTGCCGCCAGGCGATT‑TCCTGCCCTGGGTAGAGCAGACCGACCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTTGCAG                                                                                                                                                        <  8:144845/118‑1                                                                 CAGGCGATT‑TCCTGCCCTGGGTAGAGCAGACCGACCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTTGCAGGCGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATAGTCACGCTCCGCGAg                                                                                             >  8:260980/1‑146                                                                                                   ACCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTTGCAGGCGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTG                                                          <  6:77880/149‑1                                                                                                    CCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTTGCAGGCGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTGG                                                         <  7:260980/149‑1                                                                                                                                                       GCAGGCGCTCGGCAAAGTCACTGCGCTGCAAATTGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTGGCTCAACGCCTGCCCGATCACCCACTCGCCGATTTCGACGATCAGGTCGG        >  1:50079/1‑148                                                                                                                                                       GCAGGCGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTGGCTCAACGCCTGCCCGATCACCC                                   >  1:140397/1‑120                                                                                                                                                       GCAGGCGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTGGCTCAACGCCTGCCCGATCACCC                                   <  2:140397/120‑1                                                                                                                                                         AGGCGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTGGCTCAACGCCTGCCCGATCACCCACTCGCCGATTTCGACGATCAGGTCGGTCTG    <  1:329854/149‑1                                                                                                                                                           GCGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTGGCTCAACGCCTGCCCGATCACCCACTCGCCGATTTCGACGATCAGGTCGGTCTGCT  <  4:243323/149‑1                                                                                                                                                                                                                                                                                                                  GGCAAGGTACTGGGCTTCGAGGGCTTATTGCGCTGGCAGCGGCCAGGCCGTGGTGTGGTGCCGCCAGGCGATT‑TCCTGCCCTGGGTAGAGCAGACCGACCTGATCGTCGAAATCGGCGAGTGGGTGATCGGGCAGGCGTTGAGCCAGTTGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2575808‑2575962 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggcGCTCGGCAAAGTCACTGCGCTGCAAA‑TGCCGCGCGGCAATATTCACGCTCAGCGACCAGGGCTGCCCTTGGCGCTGCCAGGCCTGCAACTGGCTCAACGCCTGCCCGATCACCCACTCGCCGATTTCGACGATCAGGTCGGTCTGCT  <  NC_002947/2576042‑2575896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.