New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2881022 = | 50 (0.850) | 3 (0.050) | 3/242 | NT | 5.9% | coding (864/1176 nt) | PP_2535 | transport protein |
? | NC_002947 | 2881070 = | 48 (0.870) | coding (912/1176 nt) | PP_2535 | transport protein |
ATCGCATTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2881177‑2881022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccagCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCGGG > NC_002947/2881070‑2881213 ATCGCATTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAG > 3:195812/1‑149 TCGCATTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGC < 3:172576/149‑1 TCGCATTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGC < 3:63474/149‑1 CATTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGC > 8:164665/1‑149 caCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGCGATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAG > 1:268376/3‑148 CCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCA > 8:141583/1‑145 CCAGCTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCA < 7:141583/145‑1 ACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGC > 4:345375/1‑131 GCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCACCCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACC > 3:75088/1‑149 TGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTG > 1:164870/1‑144 TGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTG < 2:164870/144‑1 GCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCGGG > 4:246927/1‑149 ATCGCATTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGC‑ATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2881177‑2881022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccagCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCGGG > NC_002947/2881070‑2881213 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |