| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2927982 = | 66 (1.120) | 8 (0.140) | 7/246 | NT | 11.6% | coding (1249/2472 nt) | PP_2565 | UvrD/REP family helicase |
| ? | NC_002947 | 2928033 = | 59 (1.050) | coding (1300/2472 nt) | PP_2565 | UvrD/REP family helicase | |||||
TTCACCTCCAACCCAAGGTTTTCGATGAAATTGGCGGCACTGACGAACGCATCCAGCAGCGGCGCCGGGGCCAGTTCGCCCTTGACCTTGTACTCGAAGCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2928130‑2927982‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTGGGTTGGAGGTGAACAATGCGGTGGCGGCGATGAGCTTCCCGTCCGGCGATAGCGATGCACTG > NC_002947/2928033‑2928179 TTCACCTCCAACCCAAGGTTTTCGATGAAATTGGCGGCACTGACGAACGCATCCAGCAGCGGCGCCGGGGCCAGTTCGCCCTTGACCTTGTACTCGAAGCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGC > 1:61775/1‑149 TCGAAGCCAGGACCGGCCCCGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAACACCTTGGGTTGGAG > 1:323158/1‑149 GAAGCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATT > 7:191250/1‑124 GAAGCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATT < 8:191250/124‑1 GAAGCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGT > 5:185907/1‑110 GAAGCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGT < 6:185907/110‑1 GCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTG > 5:190469/1‑136 GCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTG < 6:190469/136‑1 CCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGCTACGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTGGGTTGGAGGTGAA > 1:277126/1‑148 TGGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTGGGTTGGAGGTGAACAATGCGGTGGCGGCGATGAGCTTCCCGTCCGGCGATAGCGATGCAC > 6:53602/1‑149 TGGCTTCGAGTACAAGGTCAAGGGCGAACTGACCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTGGGTTGGAGGTGAACAATGCGGTGGCGGCGATGAGCTTCCCGTCCGGCGATAGCGATGCAC > 1:37497/1‑149 GGCTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTGGGTTGGAGGTGAACAATGCGGTGGCGGCGATGAGCTTCCCGTCCGGCGATAGCGATGCACT > 8:151545/1‑149 GCTTCGAGTACAAGGTCAAGGGCGAAATGGCCCCGGCGCAGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTGGTTTGGAGATGAAAAATGCGTTGTCGGCGATGAGATTAAAGTCCGGCGATAGCGATGCACTG > 6:371879/1‑149 TTCACCTCCAACCCAAGGTTTTCGATGAAATTGGCGGCACTGACGAACGCATCCAGCAGCGGCGCCGGGGCCAGTTCGCCCTTGACCTTGTACTCGAAGCCAGGACCGGCCACGGCATCGCCCGCCAACGATGCCGCCAGGCGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2928130‑2927982‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcTTCGAGTACAAGGTCAAGGGCGAACTGGCCCCGGCGCCGCTGCTGGATGCGTTCGTCAGTGCCGCCAATTTCATCGAAAACCTTGGGTTGGAGGTGAACAATGCGGTGGCGGCGATGAGCTTCCCGTCCGGCGATAGCGATGCACTG > NC_002947/2928033‑2928179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |