New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3093175	58 (0.990)	4 (0.070)	4/246	NT	5.9%	coding (911/1131 nt)	PP_2702	porin
	?	NC_002947	= 3093243	72 (1.280)					coding (843/1131 nt)	PP_2702	porin

CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCGGGGGTTGATGAAGTGGTCATAGCCGATCATCACTCCCCACGCGTCCTTGTCGCGGGCGCTGACCTGGCGTTGCATCACTGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3093022‑3093175 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcCGGCACGCCCAGCACCACGCTGTACACCTTCGGCATGATGGCGCCGGTGGGCGAGCTGGACGTGCTGCGCCTG  <  NC_002947/3093243‑3093171                                                                                                                                                                                                                                     CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCGGGGGTTGATGAAGTGGTCATAGCCGATCATCACTCCCCACGCGTCCTTGTCGCGGGCGCTGACCTGGCGTTGCATCACTGC                                                                                <  2:72268/149‑1  CGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCGGGGGTTGATGAAGTGGTCATAGCCGATCATCACTCCCCACGCGTCCTTGTCGCGGGCGCTGACCTGGCGTTGCATCACTGC                                                                                >  3:161300/1‑148                                                       TAAAGGGCCCAGCGGGGGTTGATGAAGTGGTCATAGCCGATCATCACTCCCCACGCGTCCTTGTCGCGGGCGCTGACCTGGCGTTGCATCACTGCCAGGCCGGCACGCCCAGCACCACGCTGTACACCTTCGGCATGATGGCGCCGGTG                          >  4:281739/1‑149                                                                            ATGAAGTGGTCATAGCCGATCATCACTCCCCACGCGTCCTTGTCGCGGGCGCTGACCTGGCGTTGCATCACTGCCAGGCCGGCACGCCCAGCACCACGCTGTACACCTTCGGCATGATGGCGCCGGTGGGCGAGCTGGACGTGCTGCGC     <  3:281739/149‑1                                                                                                                   TTGTCGCGGGCGCTGACCTGGCGTTGCATCACTTCCAGGCCGGCACGCCCAGCACCACGCTGTACACCTTCGGCATGATGGCGCCGGTGGGCGAGCTGGACGTGCTGCGCCTG  >  4:77266/1‑113                                                                                                                   TTGTCGCGGGCGCTGACCTGGCGTTGCATCACTGCCAGGCCGGCACGCCCAGCACCACGCTGTACACCTTCGGCATGATGGCGCCGGTGGGCGAGCTGGACGTGCTGCGCCTG  <  3:77266/113‑1                                                                                                                                                                                                                                     CCGGCGTAGGTGACCGACGAGGCGCGCTGGTTGGCGATCATGCCAAGGCGTCCATAAAGGGCCCAGCGGGGGTTGATGAAGTGGTCATAGCCGATCATCACTCCCCACGCGTCCTTGTCGCGGGCGCTGACCTGGCGTTGCATCACTGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3093022‑3093175 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcCGGCACGCCCAGCACCACGCTGTACACCTTCGGCATGATGGCGCCGGTGGGCGAGCTGGACGTGCTGCGCCTG  <  NC_002947/3093243‑3093171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.