New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3135380	53 (0.900)	3 (0.050)	3/246	NT	6.0%	coding (33/1335 nt)	PP_2752	hypothetical protein
	?	NC_002947	= 3135418	44 (0.780)					coding (71/1335 nt)	PP_2752	hypothetical protein

GCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3135274‑3135380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGCGC  <  NC_002947/3135418‑3135272                                                                                                                                                                                                                                                                GCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCG                                                                                                           <  1:135159/149‑1                                    GCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGACGA                                                                                                       >  3:4727/1‑118                                    GCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGACGA                                                                                                       <  4:4727/118‑1                                                                                                      GCCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTG      <  1:213982/149‑1                                                                                                       CCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGG     >  7:294067/1‑149                                                                                                        CGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGC    >  2:225688/1‑149                                                                                                           CACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGCGC  >  4:220812/1‑148                                                                                                           CACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGCGC  >  4:36622/1‑148                                                                                                           CACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCAC                                                                 <  5:142526/85‑1                                                                                                           CACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCAC                                                                 >  6:142526/1‑85                                                                                                                                                                                                                                                                GCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3135274‑3135380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGCGC  <  NC_002947/3135418‑3135272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.