New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3332679 | 64 (1.090) | 3 (0.060) | 3/236 | NT | 5.6% | coding (426/918 nt) | PP_2930 | L‑serine dehydratase |
? | NC_002947 | = 3332719 | 43 (0.800) | coding (386/918 nt) | PP_2930 | L‑serine dehydratase |
AGCGACGCCGCGCCCTCGGTTTCTACCGCCAGCACAGGCACATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3332524‑3332679 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcatccaccCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCGCAATGG < NC_002947/3332719‑3332575 AGCGACGCCGCGCCCTCGGTTTCTACCGCCAGCACAGGCACATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTT > 8:88315/1‑148 GACGCCGCGCCCTCGGTTTCTACCGCCAGCACAGGCACATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATC < 7:29130/149‑1 GAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGG < 2:24911/148‑1 CCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGT < 1:191820/141‑1 CCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGT > 2:191820/1‑141 CTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGC > 5:42746/1‑149 CTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGC > 6:768/1‑149 CTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGC < 7:307989/149‑1 TTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGC > 2:117789/1‑148 TTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTC > 3:108093/1‑101 TTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTC < 4:108093/101‑1 CATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCG < 2:81842/147‑1 CATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGC < 1:117789/146‑1 tgcagCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCGCAAT < 8:340181/144‑1 CACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCGCAATGG > 2:82868/1‑149 CACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCGCAATGG < 6:42746/149‑1 AGCGACGCCGCGCCCTCGGTTTCTACCGCCAGCACAGGCACATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3332524‑3332679 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcatccaccCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCGCAATGG < NC_002947/3332719‑3332575 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |