New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 354742154 (0.920)4 (0.070) 4/246 NT 6.8% coding (366/1377 nt) PP_3132 polysaccharide transporter
?NC_002947 = 3547482 58 (1.030)coding (427/1377 nt) PP_3132 polysaccharide transporter

CAGAACATCATCCAGAGCCACCGCGGAGACGATCCGGACTTTCTCAACACCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3547272‑3547421
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCACAGCTCAGCCAGTTGGGCCAACCAAGCTCCCAGGGCCAGCAGCAGGGTAAGGGCAAACAGCAGGAAACCGCGGATGATCT  <  NC_002947/3547482‑3547336
                                                                                                                                                                                                                                                                                                         
CAGAACATCATCCAGAGCCACCGCGGAGACGATCCGGACTTTCTCAACACCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCC                                                                                                                                                      >  7:204218/1‑149
                                    GACCTTCTCAACACCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAG                                                                                                                   >  3:302902/1‑148
                                                 CCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCA                                                                                                      >  6:136044/1‑148
                                                                 GATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGG                                                                                     <  4:302902/149‑1
                                                                     ATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCAC                                                                                 <  5:136044/149‑1
                                                                                                                                                    CGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCACAGCTCAGCCAGTTGGGCCAACCAAGCTCCCAGGGCCAGCAGCAGGGTAAGGGCAAACAGCAGGAAACCGCGGATGATCT  <  8:51267/149‑1
                                                                                                                                                                                                                                                                                                         
CAGAACATCATCCAGAGCCACCGCGGAGACGATCCGGACTTTCTCAACACCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3547272‑3547421
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCACAGCTCAGCCAGTTGGGCCAACCAAGCTCCCAGGGCCAGCAGCAGGGTAAGGGCAAACAGCAGGAAACCGCGGATGATCT  <  NC_002947/3547482‑3547336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.