New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3547421 | 54 (0.920) | 4 (0.070) | 4/246 | NT | 6.8% | coding (366/1377 nt) | PP_3132 | polysaccharide transporter |
? | NC_002947 | = 3547482 | 58 (1.030) | coding (427/1377 nt) | PP_3132 | polysaccharide transporter |
CAGAACATCATCCAGAGCCACCGCGGAGACGATCCGGACTTTCTCAACACCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3547272‑3547421 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCACAGCTCAGCCAGTTGGGCCAACCAAGCTCCCAGGGCCAGCAGCAGGGTAAGGGCAAACAGCAGGAAACCGCGGATGATCT < NC_002947/3547482‑3547336 CAGAACATCATCCAGAGCCACCGCGGAGACGATCCGGACTTTCTCAACACCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCC > 7:204218/1‑149 GACCTTCTCAACACCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAG > 3:302902/1‑148 CCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCA > 6:136044/1‑148 GATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGG < 4:302902/149‑1 ATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCAC < 5:136044/149‑1 CGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCACAGCTCAGCCAGTTGGGCCAACCAAGCTCCCAGGGCCAGCAGCAGGGTAAGGGCAAACAGCAGGAAACCGCGGATGATCT < 8:51267/149‑1 CAGAACATCATCCAGAGCCACCGCGGAGACGATCCGGACTTTCTCAACACCGCCTGGACCGTGCAGATCATCCGCGGTTTCCTGCTGTTTGCCCTTACCCTGCTGCTGGCCCTGGGAGCTTGGTTGGCCCAACTGGCTGAGCTGTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3547272‑3547421 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCACAGCTCAGCCAGTTGGGCCAACCAAGCTCCCAGGGCCAGCAGCAGGGTAAGGGCAAACAGCAGGAAACCGCGGATGATCT < NC_002947/3547482‑3547336 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |