| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3755008 = | 58 (0.990) | 3 (0.050) | 3/244 | NT | 5.1% | coding (449/2202 nt) | PP_3319 | GGDEF domain‑containing sensory box protein |
| ? | NC_002947 | 3755055 = | 56 (1.010) | coding (496/2202 nt) | PP_3319 | GGDEF domain‑containing sensory box protein | |||||
AAGGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3755162‑3755008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaaCTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAACATCCAGAGTGTGAACCCAGCTGGC > NC_002947/3755055‑3755201 AAGGGCGAAAACCGGGTTGGGGTTGTTGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGTCGGATCGCAATGGAAGCCAGTTGCGCGGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTG < 5:214844/149‑1AAGGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTG < 2:237334/149‑1 AGGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGG > 2:115882/1‑149 GGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGC < 4:265003/149‑1 CGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCTCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGC > 5:176847/1‑148 CGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGC > 8:153173/1‑148 TTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTC > 6:311389/1‑149 CGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGA < 1:344574/91‑1 CGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGA > 2:344574/1‑91 AACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAACATCCAGAGTGTGAAACCAGCTGGC > 3:280310/1‑149 AACTGGCTGCCAGTGCGATCCGGCATGAGCGTGACGGCCAACGGCTGGAGGAAGGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAACATCCAGAGTGTGAACCCAGCTGGC < 6:215038/149‑1 AAGGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3755162‑3755008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaaCTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAACATCCAGAGTGTGAACCCAGCTGGC > NC_002947/3755055‑3755201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |