| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3930006 = | 47 (0.800) | 3 (0.050) | 3/248 | NT | 5.1% | coding (1102/1293 nt) | PP_5603 | FAD dependent oxidoreductase |
| ? | NC_002947 | 3930103 = | 66 (1.170) | coding (1005/1293 nt) | PP_5603 | FAD dependent oxidoreductase | |||||
TATGCCCAGGAACAAAGCCGGGTGGGGCAACCGTTCTGGGCCCGGCGCCAGGGTTGGCCGGATGCGCAACCCCTGCATGAGGCGCCTGATTGGCAAGCGGTGCGGGTTGAGCGGCGGCCGGTGCTGCGTGACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3930141‑3930006‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcCCAGAACGGTTGCCCCACCCGGCTTTGTTCCTGGGCATAGAAATCCCGGCCAATGCGGGCAAAACGCAAGAACAGCTGCTCGACCCGCTGCTGGTGAAACTGCCGCGCCAGCTCAGCCCGCTCAGGCCTGCGCAGCAACGTATTGAT > NC_002947/3930103‑3930249 TATGCCCAGGAACAAAGCCGGGTGGGGCAACCGTTCTGGGCCCGGCGCCAGGGTTGGCCGGATGCGCAACCCCTGCATGAGGCGCCTGATTGGCAAGCGGTGCGGGTTGAGCGGCGGCCGGTGCTGCGTGAC > 5:291368/1‑132TATGCCCAGGAACAAAGCCGGGTGGGGCAACCGTTCTGGGCCCGGCGCCAGGGTTGGCCGGATGCGCAACCCCTGCATGAGGCGCCTGATTGGCAAGCGGTGCGGGTTGAGCGGCGGCCGGTGCTGCGTGAC < 6:291368/132‑1 TCTGGGCCCGGCGCCAGGGTTGGCCGGATGCGCAACCCCTGCATGAGGCGCCTGATTGGCAAGCGGTGCGGGTTGAGCGGCGGCCGGTGCTGCGTGACGGGCCCAGAACGGTTGCCCCACCCGGCTTTGTTCCTGGGCATAGAAATCCC > 6:243422/1‑149 CCCGGCGCCAGGGTTGGCCGGATGCGCAACCCCTGCATGAGGCGCCTGATTGGCAAGCGGTGCGGGTTGAGCGGCGGCCGGTGCTGCGTGACGGGCCCAGAACGGTTGCCCCACCCGGCTTTGTTCCTGGGCATAGAAATCCCGGCCAA > 6:112582/1‑149 CGCCTGATTGGCAAGCGGTGCGGGTTGAGCGGCGGCCGGTGCTGCGTGACGGGCCCAGAACGGTTGCCCCACCCGGCTTTGTTCCTGGGCATAGAAATCCCGGCCAATGCGGGCAAAACGCAAGAACAGCTGCTCGACCCGCTGCTGGT < 5:112582/149‑1 CGGGCCCAGAACGGTTGCCCCACCCGGCTTTGTTCCTGGGCATAGAAATCCCGGCCAATGCGGGCAAAACGCAAGAACAGCTGCTCGACCCGCTGCTGGTGAAACTGCCGCGCCAGCTCAGCCCGCTCAGGCCTGCGCAGCAACGTATT < 3:324905/149‑1 CGGGCCCAGAACGGTTGCCCCACCCGGCTTTGTTCCTGGGCATAGAAATCCCGGCCAATGCGGGCAAAACGCAAGAACAGCTGCTCGACCCGCTGCTGGTGAAACTGCCGCGCCAGCTCAGCCCGCTCAGGCCTGCGCAGCAACGTATT < 5:243422/149‑1 GCCCAGAACGGTTGCCCCACCCGGCTTTGTTCCTGGGCATAGAAATCCCGGCCAATGCGGGCAAAACGCAAGAACAGCTGCTCGACCCGCTGCTGGTGAAACTGCCGCGCCAGCTCAGCCCGCTCAGGCCTGCGCAGCAACGTATTGAT > 7:331769/1‑149 TATGCCCAGGAACAAAGCCGGGTGGGGCAACCGTTCTGGGCCCGGCGCCAGGGTTGGCCGGATGCGCAACCCCTGCATGAGGCGCCTGATTGGCAAGCGGTGCGGGTTGAGCGGCGGCCGGTGCTGCGTGACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3930141‑3930006‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcCCAGAACGGTTGCCCCACCCGGCTTTGTTCCTGGGCATAGAAATCCCGGCCAATGCGGGCAAAACGCAAGAACAGCTGCTCGACCCGCTGCTGGTGAAACTGCCGCGCCAGCTCAGCCCGCTCAGGCCTGCGCAGCAACGTATTGAT > NC_002947/3930103‑3930249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |