| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3960501 = | 49 (0.830) | 4 (0.070) | 4/246 | NT | 8.2% | intergenic (‑117/‑212) | mnxG/PP_3491 | manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein |
| ? | NC_002947 | 3960546 = | 43 (0.770) | intergenic (‑162/‑167) | mnxG/PP_3491 | manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein | |||||
TCGCAGGATCCTGGCATGCGAATTTGCCTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3960654‑3960501‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggggCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAA > NC_002947/3960546‑3960691 TCGCAGGATCCTGGCATGCGAATTTGCCATGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCT < 1:345887/149‑1 GCAGGATCCTGGCATGCGAATTTGCCTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGG > 4:333438/1‑149 GCAGGATCCTGGCATGCGAATTTGCCTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTG < 7:30217/148‑1 CAGGATCCTGGCATGCGAATTTGCCTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGG > 4:2638/1‑149 CAGGATCCTGGCATGCGAATTTGCCTTGCAAACTAGACAATTGTGCAAGGGTACCGTGCTTTTTTACCTTGTGTGAGGCCAGCTCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGG < 6:128488/149‑1 GATCCTGGCATGCGAATTTGCCTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGGGG < 4:11297/148‑1 TGCGAATTTGCCTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTG > 3:280533/1‑134 TGCGAATTTGCCTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTG < 4:280533/134‑1 CTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGG > 7:117935/1‑125 CTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGG < 8:117935/125‑1 TTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAG > 8:12547/1‑148 CCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCAT > 5:248113/1‑139 CCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCAT < 6:248113/139‑1 CCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTG < 7:12547/149‑1 GGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATC < 1:200380/148‑1 GGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAA < 3:12555/149‑1 TCGCAGGATCCTGGCATGCGAATTTGCCTTGCACAATCGACAATTGTGCAAGGGTACCGTGCGTTTTTACCTTGTGTGAGGCCAGCGCGCGCTTGTGGAGCAGCCTTTGCCCCCACGGGATTCCGTCCCCCGATTCGGGGGAACCTGCTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3960654‑3960501‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggggCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAA > NC_002947/3960546‑3960691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |