New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3969710 =	NA (NA)	4 (0.070)	4/250	NT	NA	coding (28/336 nt)	PP_3500	transposase
	?	NC_002947	3969740 =	NA (NA)					coding (58/336 nt)	PP_3500	transposase

ACGCCCACGCCGTCGTGCACCAGTACTTTCATTCGGTTAGCCCGGCGATTGGCAAACAGATAAGCGCAGTGCGGCTTCGCCGCACCAAACACCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3969861‑3969710 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAATGAAAGTACTGGTGCACGACGGCGTGGGCGTCTGGCTTGCCGCGCGGCGCCTGAAT  >  NC_002947/3969740‑3969886                                                                                                                                                                                                                                                                                                             ACGCCCACGCCGTCGTGCACCAGTACTTTCATTCGGTTAGCCCGGCGATTGGCAAACAGATAAGCGCAGTGCGGCTTCGCCGCACCAAACACCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGT                                                                                                                                                        <  8:124953/149‑1  CGCCCACGCCGTCGTGCACCAGTACTTTCATTCGGTTAGCCCGGCGATTGGCAAACAGATAAGCGCAGTGCGGCTTCGCCGCACCAAACACCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTG                                                                                                                                                       <  6:208794/149‑1   GCCCACGCCGTCGTGCACCAGTACTTTCATTCGGTTAGCCCGGCGATTAGCAAACAGATAAGCGCAGTGCGGCTTCGCCGCACCAAACACCGCAATCACCCGGGCCAATGCGGTCTCGGTGCCCGCGCGCCTGTCCATAGGCGCGGTGG                                                                                                                                                      >  1:273960/1‑149     CCACGCCGTCGTGCACCAGTACTTTCATTCGGTTAGCCCGGCGATTGGCAAACAGATAAGCGCAGTGCGGCTTAGCCGCACCAAACACCGCAATAACCCGGGCCAATGCTTTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGC                                                                                                                                                     >  3:241805/1‑148      CACGCCGTCGTGCACCAGTACTTTCATTCGGTTAGCCCGGCGATTGGCAAACAGATAAGCGCAGTGCGGCTTCGCCGCACCAAACACCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGT                                                                                                                                                        <  5:339019/144‑1      CACGCCGTCGTGCACCAGTACTTTCATTCGGTTAGCCCGGCGATTGGCAAACAGATAAGCGCAGTGCGGCTTCGCCGCACCAAACACCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGT                                                                                                                                                        >  6:339019/1‑144                                                                                                                      TCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCACCGAGACAGCATTGGCCCGGGAGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAATGAAAGTACTGGTGCACGACGGC                                   >  1:286495/1‑149                                                                                                                         GTGCCAGCGCGCATGTCCATCGGCTCGGTGGCACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAATGAAAGTACTGGTGCACGACGGCGTG                                <  2:286495/149‑1                                                                                                                         GTGCCAGCGCGCATGTCCATCGGCTCGGTGGCACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAAT                                                         <  7:304035/124‑1                                                                                                                         GTGCCAGCGCGCATGTCCATCGGCTCGGTGGCACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAAT                                                         >  8:304035/1‑124                                                                                                                                                     TGGCACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTCCCAATCGCCGGGCTAACCGAATGAAAGTACTGGTGCACGACGGCGTGGGCGTCTGGCTTGCCGCGCGGCGCCTG     >  1:35326/1‑148                                                                                                                                                       GCACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAATGAAAGTACTGGTGCACGACGGCGTGGGCGTCTGGCTTGCCGCGCGGCGCCTGAAT  <  6:264847/149‑1                                                                                                                                                        CACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAATGAAAGTACTG                                               >  7:212189/1‑103                                                                                                                                                        CACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAATGAAAGTACTG                                               <  8:212189/103‑1                                                                                                                                                                                                                                                                                                             ACGCCCACGCCGTCGTGCACCAGTACTTTCATTCGGTTAGCCCGGCGATTGGCAAACAGATAAGCGCAGTGCGGCTTCGCCGCACCAAACACCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3969861‑3969710 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcACCGAGACAGCATTGGCCCGGGTGATTGCGGTGTTTGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTTGCCAATCGCCGGGCTAACCGAATGAAAGTACTGGTGCACGACGGCGTGGGCGTCTGGCTTGCCGCGCGGCGCCTGAAT  >  NC_002947/3969740‑3969886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.