| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4081025 = | 53 (0.900) | 3 (0.050) | 3/248 | NT | 5.2% | coding (913/999 nt) | dpkA | delta 1‑piperideine‑2‑carboxylate reductase |
| ? | NC_002947 | 4081085 = | 58 (1.030) | coding (853/999 nt) | dpkA | delta 1‑piperideine‑2‑carboxylate reductase | |||||
GAAAACGCCATGGACCGGGCAGTTGATCATCGTCATCGACCCGGGCAAGGCCGAAGGCCAGCGGTTTGCCCAGCGCAGCCGCGAGCTGGTGGAGCACATGCAGGCGGTGGGGCTGACGCGCATGCCGGGCGAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4081161‑4081025‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcTGCGCTGGGCAAACCGCTGGCCTTCGGCCTTGCCCGGGTC‑GATGACGATGATCAACTGCCCGGTCCATGGCGTTTTCGCCCCCGGATGCCCGGACCAATCGAACTCCCAGGAGAAATGACCGCCGGTCAGCGCCGCCGCCAGCAGC > NC_002947/4081085‑4081230 GAAAACGCCATGGACCGGGCAGTTGATCATCGTCATCGACCCGGGCAAGGCCGAAGGCCAGCGGTTTGCCCAGCGCAGCCGCGAGCTGGTGGAGCACATGCAGGCGGTGGGGCTGACGCGCATGCCGGGCGAGC < 5:184944/134‑1GAAAACGCCATGGACCGGGCAGTTGATCATCGTCATCGACCCGGGCAAGGCCGAAGGCCAGCGGTTTGCCCAGCGCAGCCGCGAGCTGGTGGAGCACATGCAGGCGGTGGGGCTGACGCGCATGCCGGGCGAGC > 6:184944/1‑134 AGCCGCGAGCTGGTGGAGCACATGCAGGCGGTGGGGCTGACGCGCATGCCGGGCGAGCGGCTGCGCTGGGCAAACCGCTGGCCTTCGCCCTTGCCCGGGTC‑GATGACGATGATCAACTGCCCGGTCCATGGCGTTT < 3:42531/136‑1 AGCCGCGAGCTGGTGGAGCACATGCAGGCGGTGGGGCTGACGCGCATGCCGGGCGAGCGGCTGCGCTGGGCAAACCGCTGGCCTTCGCCCTTGCCCGGGTC‑GATGACGATGATCAACTGCCCGGTCCATGGCGTTT > 4:42531/1‑136 CGCGAGCTGGTGGAGCACATGCAGGCGGTGGGGCTGACGCGCATGCCGGGCGAGCGGCTGCGCTGGGCAAACCGCTGGCCTTCGGCCTTGCCCGGGTC‑GATGACGATGATCAACTGCCCGGTCCATGGCGTTTTCGCCCCCGGATGCCC > 2:40458/1‑149 GCGGCTGCGCTGGGCAAACCGCTGGCCTTCGGCCTTGCCCGGGTCGGATGACGATGATCAACTGCCCGGTCCATGGCGTTTTCGCCCCCGGATGCCCGGACCAATCGAACTCCCAGGAGAAATGACCGCCGGTCAGCGCCGCCGCCAG > 1:263806/1‑148 GGCTGCGCTGGGCAAACCGCTGGCCTTCGGCCTTGCCCGGGTC‑GATGACGATGATCAACTGCCCGGTCCATGGCGTTTTCGCCCCCGGATGCCCGGACCAATCGAACTCCCAGGAGAAATGACCGCCGGTCAGCGCCGCCGCCAGCAGC > 8:120078/1‑149 GAAAACGCCATGGACCGGGCAGTTGATCATCGTCATCGACCCGGGCAAGGCCGAAGGCCAGCGGTTTGCCCAGCGCAGCCGCGAGCTGGTGGAGCACATGCAGGCGGTGGGGCTGACGCGCATGCCGGGCGAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4081161‑4081025‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcTGCGCTGGGCAAACCGCTGGCCTTCGGCCTTGCCCGGGTC‑GATGACGATGATCAACTGCCCGGTCCATGGCGTTTTCGCCCCCGGATGCCCGGACCAATCGAACTCCCAGGAGAAATGACCGCCGGTCAGCGCCGCCGCCAGCAGC > NC_002947/4081085‑4081230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |