| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4186187 | 71 (1.210) | 4 (0.070) | 4/244 | NT | 5.5% | intergenic (+103/‑467) | PP_3682/PP_3683 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 4186222 | 69 (1.240) | intergenic (+138/‑432) | PP_3682/PP_3683 | hypothetical protein/hypothetical protein | |||||
CAGCGATTGTGACGAAGGACTACGCCACATACGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4186035‑4186187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taagggcGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAGCTGGAGTTCGGAAGGAGAGTCCGCTGGACGCACCTAGGTAAAGCACCCGCTGGAGGGGCGCTCTCGGTTAAGGTCGGAGAAAACCTAAGTGCCTCAGATG < NC_002947/4186222‑4186078 CAGCGATTGTGACGAAGGACTACGCCACATATGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAA < 8:297737/149‑1CAGCGATTGTGACGAAGGACTACGCCACATACGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCATCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAA < 2:54228/149‑1CAGCGATTGTGACGAAGGACTACGCCACATACGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAA < 8:83151/149‑1CAGCGATTGTGACGAAGGACTACGCCACATACGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTT > 3:337105/1‑147 AGCGATTGTGACGAAGGACTACGCCACATACGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAAG > 7:30970/1‑149 AGCGATTGTGACGAAGGACTACGCCACATACGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAAG < 8:98149/149‑1 GACGAAGGACTACGCCACATACGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAAGGGCGATCGC > 4:251573/1‑149 AGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAAGGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAG < 3:251573/149‑1 CTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAAGGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAA > 5:61852/1‑126 CTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAAGGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAA < 6:61852/126‑1 TAAGGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAGCTGGAGTTCGGAAGGAGAGTCCGCTGGACGCACCTAGGTAAAGCACCCGCTGGAGGGGCGCTCTCGGTTAAGGTCGGAGAAAACCTAAGTGCCTCA < 8:319629/148‑1 GGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAGCTGGAGTTCGGAAGGAGAGTCCGCTGGACGCACCTAGGTAAAGCACCCGCTGGAGGGGCGCTCTCGGTTAAGGTCGGAGAAAACCTAAGTGCCTCAGATG > 2:160750/1‑149 GGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAGCTGGAGTTCGGAAGGAGAGTCCGCTGGACGCACCTAGGTAAAGCACCCGCTGGAGGGGCGCTCTCGGTTAAGGTCGGAGAAAACCTAAGTGCCTCAGATG < 2:238980/149‑1 GGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAGCTGGAGTTCGGAAGGAGAGTCCGCTGGACGCACCTAGGTAAAGCACCCGCTGGAGGGGCGCTCTCGGTTAAGGTCGGAGAAAACCTAAGTGCCTCAGATG > 2:314004/1‑149 GGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAGCTGGAGTTCGGAAGGAGAGTCCGCTGGACGCACCTAGGTAAAGCACCCGCTGGAGGGGCGCTCTCGGTTAAGGTCGGAGAAAACCTAAGTGCCTCAGATG > 4:316778/1‑149 GGGCGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAGCTGGAGTTCGGAAGGAGAGTCCGCTGGACGCACCTAGGTAAAGCACCCGCTGGAGGGGCGCTCTCGGTTAAGGTCGGAGAAAACCTAAGTGCCTCAGATG < 5:91947/149‑1 CAGCGATTGTGACGAAGGACTACGCCACATACGGCTGGAGCCGCATCTGAGGCACTTAGGTTTTCTCCGACCTTAACCGAGAGCGCCCCTCCAGCGGGTGCTTTACCTAGGTGCGTCCAGCGGACTCTCCTTCCGAACTCCAGCTTTAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4186035‑4186187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taagggcGATCGCGTCCGCTTAAAAATGCGCGGACACAAAATGCCCTTAAAGCTGGAGTTCGGAAGGAGAGTCCGCTGGACGCACCTAGGTAAAGCACCCGCTGGAGGGGCGCTCTCGGTTAAGGTCGGAGAAAACCTAAGTGCCTCAGATG < NC_002947/4186222‑4186078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |