New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4258664 =	62 (1.050)	3 (0.050)	3/252	NT	5.1%	coding (211/747 nt)	PP_3732	enoyl‑CoA hydratase/isomerase family protein
	?	NC_002947	4258718 =	52 (0.900)					coding (265/747 nt)	PP_3732	enoyl‑CoA hydratase/isomerase family protein

CTGACCAGCACCTGGTCGCAGTGCAGCAACAGGGTGGCCCCGATGCCGATCGCCGCACCACTGACCGCTGCGATCAGCGGCTTGTCCAGGCCCATGACCACCCGCATCAGGCGGAACACTGGGCTGTCCAGGTCGCTGGGCGGGTTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4258812‑4258664 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcATGGGCCTGGACAAGCCGCTGATCGCAGCGGTCAGTGGTGCGGCGATCGGCATCGGGGCCACCCTGTTGCTGCACTGCGACCAGGTGCTGGTCAGCCGCTCG‑‑ACCAAGCTGCGCATGCCTTTCGCGCCGCTGGGTGTGTGCCCGGAG  >  NC_002947/4258718‑4258864                                                                                                                                                                                                                                                                                                            CTGACCAGCACCTGGTCGCAGTGCAGCAACAGGGTGGCCCCGATGCCGATCGCCGCACCACTGACCGCTGCGATCAGCGGCTTGTCCAGGCCCATGACCACCCGCATCAGGCGGAACACTGGGCTGTCCAGGTCGCTGGGCGGGTTGTC                                                                                                                                                       <  7:38905/149‑1                                                                                              ATGACCACCCGCATCAGGCGGAACACTGGGCTGTCCAGGTCGCTGGGCGGGTTGTCATGGGCCTGGACAAGCCGCTGATCGCAGCGGTCAGTGGTGCGGCGATCGGCATCGGGGCCACCCTGTTGCTGCACTGCGACCAGGTGC                                                               <  3:86370/144‑1                                                                                              ATGACCACCCGCATCAGGCGGAACACTGGGCTGTCCAGGTCGCTGGGCGGGTTGTCATGGGCCTGGACAAGCCGCTGATCGCAGCGGTCAGTGGTGCGGCGATCGGCATCGGGGCCACCCTGTTGCTGCACTGCGACCAGGTGC                                                               >  4:86370/1‑144                                                                                                      CCGCATCAGGCGGAACACTGGGCTGTCCAGGTCGCTGGGCGGGTTGTCATGGGCCTGGACAAGCCGCTGATCGCAGCGGTCAGTGGTGCGGCGATCGGCATCGGGGCCACCCTGTTGCTGCACTGCGACCAGGTGCTGGTCAGCCGC                                                    >  6:113057/1‑147                                                                                                                                                    TCATGGGCCTGGACAAGCCGCTGATCGCAGCGGTCAGTGGTGCGGCGATCGGCATCGGGGCCACCCTGTTGCTGCACTGCGACCAGGTGCTGGTCAGCCGTGGGGTACCAAGCTGCGCATGCCTTTCGCGCCGCTGGGTGTGTGCACG     >  1:308898/1‑148                                                                                                                                                    TCATGGGCCTGGACAAGCCGCTGATCGCAGCGGTCAGTGGTGCGGCGATCGGCATCGGGGCCACCCTGTTGCTGCACTGCGACCAGGTGCTGGTCAGCCGCTCG‑‑ACCAAGCTGCGCATGCCTTTCGCGCCGCTGGGTGTGTGCCCGGAG  >  4:338587/1‑149                                                                                                                                                    TCATGGGCCTGGACAAGCCGCTGATCGCAGCGGTCAGTGGTGCGGCGATCGGCATCGGGGCCACCCTGTTGCTGCACTGCGACCAGGTGCTGGTCAGCCGCTCG‑‑ACCAAGCTGCGCATGCCTTTCGCGCCGCTGGGTGTGTGCCCGGAG  >  5:346846/1‑149                                                                                                                                                                                                                                                                                                            CTGACCAGCACCTGGTCGCAGTGCAGCAACAGGGTGGCCCCGATGCCGATCGCCGCACCACTGACCGCTGCGATCAGCGGCTTGTCCAGGCCCATGACCACCCGCATCAGGCGGAACACTGGGCTGTCCAGGTCGCTGGGCGGGTTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4258812‑4258664 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcATGGGCCTGGACAAGCCGCTGATCGCAGCGGTCAGTGGTGCGGCGATCGGCATCGGGGCCACCCTGTTGCTGCACTGCGACCAGGTGCTGGTCAGCCGCTCG‑‑ACCAAGCTGCGCATGCCTTTCGCGCCGCTGGGTGTGTGCCCGGAG  >  NC_002947/4258718‑4258864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.