New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4343304 | 55 (0.930) | 4 (0.070) | 4/244 | NT | 7.1% | coding (184/1149 nt) | PP_3817 | polyamine ABC transporter ATP‑binding protein |
? | NC_002947 | = 4343341 | 52 (0.930) | coding (221/1149 nt) | PP_3817 | polyamine ABC transporter ATP‑binding protein |
CGGCAAAACCCTGGTCAGCCTGCGCGGCCTGAACAAGCACTACGGCGACTTCACCGCCGTGGACAACCTCGACCTGGAGATCCAGGACGGCGAGTTCCTGACCTTCCTCGGTTCCAGCGGGTCGGGCAAGTCCACCACCCTGTCGATGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4343150‑4343304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccgTCGACCAGGATCTCGCCGCTGCTCGGTGTTTCGAAGCCGGCCAGCATCGACAGGGTGGTGGACTTGCCCGACCCGCTGGAACCGAGGAAGGTCAGGAACTCGCCGTCCTGGATCTCCAGGTCGAGGTTGTCCACGGCGGTGAA < NC_002947/4343341‑4343199 CGGCAAAACCCTGGTCAGCCTGCGCGGCCTGAACAAGCACTACGGCGACTTCACCGCCGTGGACAACCTCGACCTGGAGATCCAGGACGGCGAGTTCCTGACCTTCCTCGGTTCCAGCGGGTCGGGCAAGTCCACCACCCTGTCGATGC < 4:254449/149‑1 AACCCTGGTCAGCCTGCGCGGCCTGAACAAGCACTACGGCGACTTCACCGCCGTGGACAACCTCGACCTGGAGATCCAGGACGGCGAGTTCCTGACCTTCCTCGGTTCCAGCGGGTCGGGCAAGTCCACCACCCTGTCGATGCTGGCCG > 8:223209/1‑149 CCTGCGCGGCCTGAACAAGCACTACGGCGACTTCACCGCCGTGGACAACCTCGACCTGGAGATCCAGGACGGCGAGTTCCTGACCTTCCTCGGTTCCAGCGGGTCGGGCAAGTCCACCACCCTGTCGATGCTGGCCGTCGACCAGGATC > 7:138070/1‑149 ACGGCGACTTCACCGCCGTGGACAACCTCGACCTGGAGATCCAGGACGGCGAGTTCCTGACCTTCCTCGGTTCCAGCGGGTCGGGCAAGTCCACCACCCTGTCGATGCTGGCCGTCGACCAGGATCTCGCCGCTGCTCGGTGTTTCG > 7:218395/1‑147 CACCGCCGTGGACAACCTCGACCTGGAGATCCAGGACGGCGAGTTCCTGACCTTCCTCGGTTCCAGCGGGTCGGGCAAGTCCACCACCCTGTCGATGCTGGCCGTCGACCAGGATCTCGCCGCTGCTCGGTGTTTCGAAGCCGGCCA < 8:218395/147‑1 ACCGCCGTGGACAACCTCGACCTGGAGATCCAGGACGGCGAGTTCCTGACCTTCCTCGGTTCCAGCGGGTCGGGCAAGTCCACCACCCTGTCGATGCTGGCCGTCGACCAGGATCTCGCCGCTGCTCGGTGTTTCGAAGCCGGCCAGCA < 8:138070/149‑1 GCCGTCGACCAGGATCTCGCCGCTGCTCGGTGTTTCGAAGCCGGCCAGCATCGACAGGGTGGTGGACTTGCCCGACCCGCTGGAACCGAGGAAGGTCAGGATCTCGCCGTCCTGGATCTCCTGGTCGAGGTTGTCCACGGCGGTGAt < 3:102306/147‑2 CGGCAAAACCCTGGTCAGCCTGCGCGGCCTGAACAAGCACTACGGCGACTTCACCGCCGTGGACAACCTCGACCTGGAGATCCAGGACGGCGAGTTCCTGACCTTCCTCGGTTCCAGCGGGTCGGGCAAGTCCACCACCCTGTCGATGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4343150‑4343304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccgTCGACCAGGATCTCGCCGCTGCTCGGTGTTTCGAAGCCGGCCAGCATCGACAGGGTGGTGGACTTGCCCGACCCGCTGGAACCGAGGAAGGTCAGGAACTCGCCGTCCTGGATCTCCAGGTCGAGGTTGTCCACGGCGGTGAA < NC_002947/4343341‑4343199 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |