| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4378615 = | 52 (0.880) | 5 (0.090) | 5/244 | NT | 9.1% | coding (98/540 nt) | PP_3854 | lysozyme |
| ? | NC_002947 | 4378653 = | 51 (0.920) | coding (60/540 nt) | PP_3854 | lysozyme | |||||
GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4378768‑4378615‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTGGCCATCACAGAGGGAGTGGCCT > NC_002947/4378653‑4378799 GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAG < 8:95974/149‑1GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAG > 4:179731/1‑149GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAG < 2:363544/149‑1 TATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGC > 7:15863/1‑148 TTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAG > 5:206610/1‑149 TTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCAGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCA < 2:280067/148‑1 ATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGC < 2:5201/95‑1 ATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGC > 1:5201/1‑95 TAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGA > 2:185657/1‑149 GACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGA < 1:185657/147‑1 GCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTT > 8:34795/1‑148 TGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAA > 6:45193/1‑148 GTCCGAAGGCACTTCGACTATCAAGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTAT < 5:45193/149‑1 AGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGC < 8:324617/123‑1 AGGACAGCATGTCTAGGAATGCAATCACGTTTACGCCGCAGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTTGACATCACAGAGGGAGT < 8:165319/149‑1 CCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTGGCCATCACAGAGGGAGTGGC < 5:83019/149‑1 CCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTGGCCATCACAGAGGGAGTGGC < 1:339074/149‑1 AGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGTCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTGGCCATCACAGAGGGAGTGGCCT < 2:299652/149‑1 GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4378768‑4378615‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTGGCCATCACAGAGGGAGTGGCCT > NC_002947/4378653‑4378799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |