New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4550424 =	71 (1.210)	4 (0.070)	4/248	NT	6.0%	coding (1161/1368 nt)	pydX	NADP‑dependent dihydropyrimidine dehydrogenase subunit
	?	NC_002947	4550462 =	57 (1.010)					coding (1199/1368 nt)	pydX	NADP‑dependent dihydropyrimidine dehydrogenase subunit

CCGTGTTGCACGGCCTGCACGGTAAGGTCCTGCCCCAGCGCGGTGCAGTCGCCGCCTGCGTACACGCCCGGCAGGCTGGTCTGCAGGTTTTCGTCAACGCGGATGCGCTCACCCTCGCGGGCCAGTTGCGCAGCC‑ACCGGGTCGCCGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4550573‑4550424 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggGTG‑‑AGCGCATCCGCGTTGACGAAAACCTGCAGACCAGCCTGCCGGGCGTGTACGCAGGCGGCGACTGCACCGCGCTGGGGCAGGACCTTACCGTGCAGGCCGTGCAACA  >  NC_002947/4550462‑4550570                                                                                                                                                                                                                                                                        CCGTGTTGCACGGCCTGCACGGTAAGGTCCTGCCCCAGCGCGGTGCAGTCGCCGCCTGCGTACACGCCCGGCAGGCTGGTCTGCAGGTTTTCGTCAACGCGGATGCGCTCACCCTCGCGGGCCAGTTGCGCAGCC‑ACCGGGTCGCCGA                                                                                                                   <  2:52777/148‑1                                                                                             GTCAACGCGGATGCGCTCACCCTCGCGGGCCAGTTGCGCAGCCGACCGGGTCGCCGAGGCTGGCATCGTCAAAGCGTTGACGAAAACCTGCAGACCAGCCTGCCGGGCGTGTACGCAGGCGGCGACTGCACCGCGCTGGGGCAGGACCT                       >  1:258455/1‑149                                                                                                               ACCCTCGCGGGCCAGTTGCGCAGCC‑ACCGGGTCGCCGAGGGTG‑‑AGCGAATCCGCGTTGACGAAAACCTGCAGACCAGCCAGCCGGCCGTCTACGCAGGCGGCCACTGCACCGCGCTGGGGCACGACCTAACCCAGCAGGCCCTGCACCA  >  5:282875/1‑149                                                                                                                   TCGCGGGCCAGTTGCGCAGCC‑ACCGGGTCGCCGAGGGTG‑‑AGCGCATCCGCGTTGACGAAAACCTGCAGACCAGCCTGCCGGGCGTGTACGCAGGCGGCGACTGCACCGCGCTGGGGCAGGACCTTACCGTGCAGGCCGTGC      >  1:141579/1‑141                                                                                                                   TCGCGGGCCAGTTGCGCAGCC‑ACCGGGTCGCCGAGGGTG‑‑AGCGCATCCGCGTTGACGAAAACCTGCAGACCAGCCTGCCGGGCGTGTACGCAGGCGGCGACTGCACCGCGCTGGGGCAGGACCTTACCGTGCAGGCCGTGC      <  2:141579/141‑1                                                                                                                                                                                                                                                                        CCGTGTTGCACGGCCTGCACGGTAAGGTCCTGCCCCAGCGCGGTGCAGTCGCCGCCTGCGTACACGCCCGGCAGGCTGGTCTGCAGGTTTTCGTCAACGCGGATGCGCTCACCCTCGCGGGCCAGTTGCGCAGCC‑ACCGGGTCGCCGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4550573‑4550424 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggGTG‑‑AGCGCATCCGCGTTGACGAAAACCTGCAGACCAGCCTGCCGGGCGTGTACGCAGGCGGCGACTGCACCGCGCTGGGGCAGGACCTTACCGTGCAGGCCGTGCAACA  >  NC_002947/4550462‑4550570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.