New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4728851	74 (1.260)	4 (0.070)	4/244	NT	5.6%	coding (985/1167 nt)	sucC	bifunctional succinyl‑CoA synthetase subunit beta/glutaryl‑CoA synthetase subunit beta
	?	NC_002947	= 4728875	66 (1.190)					coding (961/1167 nt)	sucC	bifunctional succinyl‑CoA synthetase subunit beta/glutaryl‑CoA synthetase subunit beta

TGTTGAGCAGCGTCGGTCAGGCTGGTTGCCGCAATGATGTTCAAACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4728697‑4728851 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggcGGCATCGTTCGCTGCGACATGATTGCCGAAGGCATCATCGGTGCAGTGAAAGAAGTTGGCGTTAAAGTTCCGGTCGTCGTTCGCCTCGAAGGCAACAACGCCGAACTGGGCGCTAAAGTACTGGCAGAAAGCGGTTTGAACATC  <  NC_002947/4728875‑4728732                                                                                                                                                                                                                                                                                                             TGTTGAGCAGCGTCGGTCAGGCTGGTTGCCGCAATGATGTTCAAACCGCTTTATGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGCCGCCCGGAACTTTAACGCCAACTTCTTTCACTGCACAGATGATTCC                                                                                                                                                        >  4:262891/1‑149   TTGAGCAGCGTCGGTCAGGCTGGTTGCCGCAATGATGTTCAAACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCTT                                                                                                                                                      >  6:203199/1‑149   TTGAGCAGCGTCGGTCAGGCTGGTTGCCGCAATGATGTTCAAACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCT                                                                                                                                                       >  6:164414/1‑148       GCAGCGTCGGTCAGGCTGGTTGCCGCAATGATGTTCAAACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCTTCGG                                                                                                                                                   >  1:32175/1‑148                     GCTGGTTGCCGCAATGATGTTCAAACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCTTCGGCGGCATCGTTCGCTG                                                                                                                                    >  6:374852/1‑149                                        TTCAAACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCTTCGGCGGCATCGTTCGCTGCGACATGATTGCCGAAGG                                                                                                                  <  5:374852/148‑1                                            AACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCTTCGGCGGCATCGTTCGCTGCGACATGATTGCCGAAGGCA                                                                                                                <  1:260159/146‑1                                            AACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCTTCGGCGGCATCGTTCGCTGCGACATGATTGCCGAAGGCA                                                                                                                >  2:260159/1‑146                                                                                                                                                        CGGCGGCATCGTTCGCTGCGACATGATTGCCGAAGGCATCATCGGTGCAGTGAAAGAAGTTGGCGTTAAAGTTCCGGTCGTCGTTCGCCTCGAAGGCAACAACGCCGAACTGGGCGCTAAAGTACTGGCAGAAAGCGGTTTGAACATC  <  7:10049/148‑1                                                                                                                                                        CGGCGGCATCGTTCGCTGCGACATGATTGCCGAAGGCATCATCGGTGCAGTGAAAGAAGTTGGCGTTAAAGTTCCGGTCGTCGTTCGCCTCGAAGGCAACAACGCCGAACTGGGCGCTAAAGTACTGGCAGAAAGCGGTTTGAACAT   <  1:84786/147‑1                                                                                                                                                                                                                                                                                                             TGTTGAGCAGCGTCGGTCAGGCTGGTTGCCGCAATGATGTTCAAACCGCTTTCTGCCAGTACTTTAGCGCCCAGTTCGGCGTTGTTGCCTTCGAGGCGAACGACGACCGGAACTTTAACGCCAACTTCTTTCACTGCACCGATGATGCCTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4728697‑4728851 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggcGGCATCGTTCGCTGCGACATGATTGCCGAAGGCATCATCGGTGCAGTGAAAGAAGTTGGCGTTAAAGTTCCGGTCGTCGTTCGCCTCGAAGGCAACAACGCCGAACTGGGCGCTAAAGTACTGGCAGAAAGCGGTTTGAACATC  <  NC_002947/4728875‑4728732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.