| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5679023 | 68 (1.160) | 5 (0.090) | 4/244 | NT | 7.1% | coding (649/1407 nt) | bioA | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA |
| ? | NC_002947 | = 5679038 | 67 (1.200) | coding (664/1407 nt) | bioA | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA | |||||
ACCGAAACCTACAAGGCGCTGCTGCTCGACACCCTCAAGGTGCCAAGCCCTGACTGCTACCTGCGCCCCGAGGGCATGAGCTGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCGAACACCACGCCTCGATCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5678870‑5679023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagcgGCTCGACGATCACGGCGCTGATCGAG < NC_002947/5679038‑5679013 ACCGAAACCTACAAGGCGCTGCTGCTCGACACCCTCAAGGTGCCAAGCCCTGACTGCTACCTGCGCCCCGAGGGCATGAGCTGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCGAACACCACGCCTCGA < 6:100093/148‑1ACCGAAACCTACAAGGCGCTGCTGCTCGACACCCTCAAGGTGCCAAGCCCTGACTGCTACCTGCGCCCCGAGGGCATGAGCTGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCGAACACCACGCCTCGA < 6:105359/148‑1 AACCTACAAGGCGCTGCTGCTCGACACCCTCAAGGTGCCAAGCCCTGACTGCTACCTGCGCCCCGAGGGCATGAGCTGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCGAACACCACGCCTCGATCAGCG > 1:274234/1‑149 ACCCTCAAGGTGCCAAGCCCTGACTGCTACCTGCGCCCCGAGGGCATGAGCTGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCGAACACCACGCCTCGATCAGCGGCTCGACGATCACGGCGCTGATCGA < 5:268752/149‑1 TGCGCCCCGAGGGCATGAGCTGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCGAACACCACGCCTCGATCAGCGGCTCGACGATCACGGCGCTGATCGA > 5:69716/1‑118 TGCGCCCCGAGGGCATGAGCTGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCGAACACCACGCCTCGATCAGCGGCTCGACGATCACGGCGCTGATCGA < 6:69716/118‑1 TGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCAAACACCACGCCTCGATCAGCGGCTCGACGATCACGGCGCTGATCGAG > 1:158215/1‑99 TGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCAAACACCACGCCTCGATCAGCGGCTCGACGATCACGGCGCTGATCGAG < 2:158215/99‑1 ACCGAAACCTACAAGGCGCTGCTGCTCGACACCCTCAAGGTGCCAAGCCCTGACTGCTACCTGCGCCCCGAGGGCATGAGCTGGGAGGAGCACTCGCGCAACATGTTCCAGGCCATGGAGCAGACCCTGGCCGAACACCACGCCTCGATCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5678870‑5679023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagcgGCTCGACGATCACGGCGCTGATCGAG < NC_002947/5679038‑5679013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |