| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5850864 | 49 (0.830) | 3 (0.050) | 3/242 | NT | 6.0% | coding (1569/1842 nt) | ilvD | dihydroxy‑acid dehydratase |
| ? | NC_002947 | = 5850932 | 48 (0.870) | coding (1637/1842 nt) | ilvD | dihydroxy‑acid dehydratase | |||||
GACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5850709‑5850864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgatcAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACTTG < NC_002947/5850932‑5850786 GACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCT < 3:332650/149‑1GACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTACGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCT > 1:676/1‑149 GTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGAT > 7:316443/1‑149 GTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGT > 7:99783/1‑145 GTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGT < 8:99783/145‑1 AAAGGCCTGGGCAAGGCCTGCGCCCTGCTCCCCGACGGGCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAG < 3:341707/149‑1 GGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCC < 5:351953/131‑1 GGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCC > 6:351953/1‑131 TCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGA < 1:110181/149‑1 TCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGA < 3:307718/149‑1 TCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCC < 8:197700/98‑1 TCGATCAGTACCTTGTCGCCGGCGCGCACCAGGGCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGA < 4:247046/149‑1 GATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACT > 4:2571/1‑149 CAGTACCTTGTCGCCGTCGCGCACCAGGCGGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACTTG < 6:277898/148‑1 GACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5850709‑5850864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgatcAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACTTG < NC_002947/5850932‑5850786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |