| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5925111 = | 63 (1.070) | 4 (0.070) | 4/246 | NT | 5.8% | coding (1034/1083 nt) | gcvT‑II | aminomethyltransferase |
| ? | NC_002947 | 5925158 = | 69 (1.230) | coding (987/1083 nt) | gcvT‑II | aminomethyltransferase | |||||
CCATCAGGTCGTGCGTGTAGCCGGCATTGGCGAAGGGGAGATCACCAGTGGTAGTTTCTCGCCTACGCTGAGCAAGTCCATTGCGTTGGCGCGTGTGCCTATGGCTACCGGGGATCGGGCCGAGGTGGAAATTCGCGGCAAGTGGTACCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5925263‑5925111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggtAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCAC > NC_002947/5925158‑5925301 CCATCAGGTCGTGCGTGTAGCCGGCATTGGCGAAGGGGAGATCACCAGTGGTAGTTTCTCGCCTACGCTGAGCAAGTCCATTGCGTTGGCGCGTGTGCCTATGGCTACCGGGGATCGGGCCGAGGTGGAAATTCGCGGCAAGTGGTACC > 1:68089/1‑149 ATCAGGTCGTGCGTGTAGCCGGCATTGGCGAAGGGGAGATCACCAGTGGTAGTTTCTCGCCTACGCTGAGCAAGTCCATTGCGTTGGCGCGTGTGCCTATGGCTACCGGGGATCGGGCCGAGGTGGAAATTCGCGGCAAGTGGTACCCG < 3:3189/149‑1 ATCAGGTCGTGCGTGTAGCCGGCATTGGAGAAGGGGAGATAACAAGTGGTAGTTTCTCGCCTACGCTGAGCAAGTCCATTGCGTTGGCGCGTGTGCCTATGGCTACCGGGGATCGGGCGGAGGTGGAAATTCGCGGCAAGTGGTACCCG > 8:154042/1‑149 GCCTATGGCTACCGGGGATCGGGCCGAGGTGGAAATTCGCGGCAAGTGGTACCCGGTAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCC < 7:202951/128‑1 GCCTATGGCTACCGGGGATCGGGCCGAGGTGGAAATTCGCGGCAAGTGGTACCCGGTAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCC > 8:202951/1‑128 CTACCGGGGATCGGGCCGAGGTGGAAATTCGCGGCAAGTGGTACCCGGTAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACC > 4:107829/1‑149 GCGGCAAGTGGTACCCGGTAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCC < 3:107829/149‑1 CCCGGTAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGA > 5:106908/1‑145 CCCGGTAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGA < 6:106908/145‑1 CCGGTAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCAC < 4:3189/149‑1 CCATCAGGTCGTGCGTGTAGCCGGCATTGGCGAAGGGGAGATCACCAGTGGTAGTTTCTCGCCTACGCTGAGCAAGTCCATTGCGTTGGCGCGTGTGCCTATGGCTACCGGGGATCGGGCCGAGGTGGAAATTCGCGGCAAGTGGTACCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5925263‑5925111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggtAGCCATAGGCACACGCGCCAACGCAATGGACTTGCTCAGCGTAGGCGAGAAACTACCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCAC > NC_002947/5925158‑5925301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |