New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	131590 =	67 (1.140)	5 (0.090)	4/250	NT	7.6%	coding (116/303 nt)	PP_0125	cytochrome c‑type protein
	?	NC_002947	131622 =	57 (1.000)					coding (148/303 nt)	PP_0125	cytochrome c‑type protein

GCGCGGCCCCCAACCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGTGGATTGTGCATGGACTGCAGTGCCGAGGAC  >  NC_002947/131444‑131732                                                                                                                                                    |                                                                                                                                                  gggactgccgctcatccaaaggatgaccaaacggtagtcctcggcactgcagtccatgcacaatccacgcggcggcatagccttgaaaccctgggtcacgtgcttcaccagtacatccatgccttgcgccagccttggctcccatgct                                                                                                                                                   >  2:185383‑M1/148‑148 (MQ=255)   gcgGCCCCCAACCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCca                                                                                                                                               >  4:112231/1‑149 (MQ=255)   gactgccgctcatccaaaggatgaccaaacggtagtcctcggcactgcagtccatgcacaatccacgcggcggcatagccttgaaaccctgggtcacgtgcttcaccagtacatccatgccttgcgccagccttggctcccatgcTGcc                                                                                                                                                <  3:20701‑M1/4‑1 (MQ=255)        ccgctcatccaaaggatgaccaaacggtagtcctcggcactgcagtccatgcacaatccacgcggcggcatagccttgaaaccctgggtcacgtgcttcaccagtacatccatgccttgcgccagccttggctcccatgcTGCCACAgg                                                                                                                                           <  6:284014‑M1/9‑1 (MQ=255)         cccAACCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCa                                                                                                                                         >  5:110516/1‑149 (MQ=255)         cccAACCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCa                                                                                                                                         >  5:252425/1‑149 (MQ=255)         cccAACCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTGTTTCCGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACCCCGGGCAGTTGCCCCAGGCa                                                                                                                                         >  2:218067/1‑149 (MQ=255)          ccAACCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCAc                                                                                                                                        <  1:231366/149‑1 (MQ=255)           cAACCCTGAAGGTCGTTCCGCATGGCGAAATGGTTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCAcc                                                                                                                                       <  1:302460/149‑1 (MQ=255)            aaCCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCAccc                                                                                                                                      <  6:110516/149‑1 (MQ=255)            aaCCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCAcc                                                                                                                                       >  2:124217/1‑148 (MQ=255)                   aaGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACggg                                                                                                                               <  8:324343/149‑1 (MQ=255)                     ggTCGTTCCACATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑Gt                                                                                                                          <  8:169692/149‑1 (MQ=255)                      gTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGGTGCCACAGGAACCCAGACggcggg                                                                                                                            >  4:271635/1‑145 (MQ=255)                                  gtagtcctcggcactgcagtccatgcacaatccacgcggcggcatagccttgaaaccctgggtcacgtgcttcaccagtacatccatgccttgcgccagccttggctcccatgcTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGgcagca                                                                                                              >  1:19081‑M1/115‑149 (MQ=255)                                  ggCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCAt                                                                                                             >  5:20351/1‑149 (MQ=255)                                   tagtcctcggcactgcagtccatgcacaatccacgcggcggcatagccttgaaaccctgggtcacgtgcttcaccagtacatccatgccttgcgccagccttggctcccatgcTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCAt                                                                                                             >  1:147744‑M1/114‑149 (MQ=255)                                   gCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTTCGGCCTGTCACACAGGGCAGTTGCCACAGCCACCAAGAAGGG‑‑‑GTGACCGGGCAGCAtc                                                                                                            >  7:264170/1‑148 (MQ=255)                                     gAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACAGGGCAGTTGCCACAGGCACACAGACGGG‑‑‑GTGACCGGGCAGCATgg                                                                                                           >  1:93888/1‑148 (MQ=255)                                        ctcggcactgcagtccatgcacaatccacgcggcggcatagccttgaaaccctgggtcacgtgcttcaccagtacatccatgccttgcgccagccttggctcccatgcTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGa                                                                                                         >  5:284014‑M1/109‑148 (MQ=255)                                            ctgctTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACACAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAg                                                                                                   <  6:20351/149‑1 (MQ=255)                                               cttgctGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAgg                                                                                                  <  6:252425/147‑1 (MQ=255)                                                  gctGTCGGTATGTTCCTGCCGTTATTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTg                                                                                               <  1:245518/147‑1 (MQ=255)                                                   cgggcGGCATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGCTCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCCGACGGG‑‑‑GTGACCGTTCAGCATTCGAGCCAAGGCTGgc                                                                                             <  6:163434/144‑1 (MQ=255)                                                    tGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGgcg                                                                                            >  5:53972/1‑148 (MQ=255)                                                     gTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGgcgc                                                                                           >  1:246202/1‑148 (MQ=255)                                                         gTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGc                                                                                      <  3:112231/149‑1 (MQ=255)                                                          tATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCaa                                                                                         >  6:87381/1‑145 (MQ=255)                                                          tATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCaa                                                                                         <  5:87381/145‑1 (MQ=255)                                                          tATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCa                                                                                     >  8:123422/1‑149 (MQ=255)                                                              ttccttccGTTTTTCAGCGCTCAGGCTACACAGGATCCCTA‑GGTGTTGTACAACCGCACGTGTGCGTCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGa                                                                                 <  8:264170/149‑1 (MQ=255)                                                              ttCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGa                                                                                 <  5:146302/149‑1 (MQ=255)                                                              ttCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGCGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCAt                                                                                    <  2:249975/146‑1 (MQ=255)                                                              ttCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGAGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCAt                                                                                    >  1:249975/1‑146 (MQ=255)                                                                ccTGCCGTTTTTCAGCACACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGAt                                                                                <  6:291103/148‑1 (MQ=255)                                                                  tGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGt                                                                              >  6:237259/1‑148 (MQ=255)                                                                   gCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGgca                                                                                                                 <  5:296636/112‑1 (MQ=255)                                                                   gCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGgca                                                                                                                 >  6:296636/1‑112 (MQ=255)                                                                   gCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGAACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCAGGCGCAAGGCATGGATGTAc                                                                            >  4:182558/1‑149 (MQ=255)                                                                    ccGTGTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTAc                                                                            <  3:271635/148‑1 (MQ=255)                                                                      gTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGgca                                                                                                                 <  2:151614/109‑1 (MQ=255)                                                                      gTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGgca                                                                                                                 >  1:151614/1‑109 (MQ=255)                                                                       tttttCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGt                                                                        <  8:108872/149‑1 (MQ=255)                                                                          ttCAGCGCACAGGCTACACAGGATCCCGAGGGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGCCGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTg                                                                       >  1:38792/1‑148 (MQ=255)                                                                          ttCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGc                                                                                                 >  1:128777/1‑121 (MQ=255)                                                                          ttCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGc                                                                                                 <  2:128777/121‑1 (MQ=255)                                                                           tCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGaa                                                                     <  5:327723/148‑1 (MQ=255)                                                                           tCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGaa                                                                     <  5:237259/148‑1 (MQ=255)                                                                                gcACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑Gt                                                                                                                          <  8:22773/90‑1 (MQ=255)                                                                                gcACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑Gt                                                                                                                          >  7:22773/1‑90 (MQ=255)                                                                                             aGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTc                                                  <  6:53972/149‑1 (MQ=255)                                                                                                 tCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAgg                                              <  7:123422/149‑1 (MQ=255)                                                                                                 tCCCGA‑GGTGTTGTACAACCGAACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAgg                                              >  1:25766/1‑149 (MQ=255)                                                                                                    cGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCGAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTa                                           <  6:377178/149‑1 (MQ=255)                                                                                                    cGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTa                                           >  3:231800/1‑149 (MQ=255)                                                                                                    cGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTa                                           >  1:143426/1‑149 (MQ=255)                                                                                                     gA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTAt                                          >  4:251683/1‑149 (MQ=255)                                                                                                              gtACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCcgccgc                                  >  1:147444/1‑149 (MQ=255)                                                                                                                 cAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGaa                                                                     >  7:35161/1‑111 (MQ=255)                                                                                                                 cAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGaa                                                                     <  8:35161/111‑1 (MQ=255)                                                                                                                 cAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGt                                <  2:246202/148‑1 (MQ=255)                                                                                                                  aaCCGCACGTGTGCGGCCTGTCTAACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCAAGGGTTTCAAGGCTATGCCGCCGCGTg                               >  7:236827/1‑148 (MQ=255)                                                                                                                  aaCCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACggg‑‑‑g                                                                                                                           <  8:311657/56‑1 (MQ=255)                                                                                                                  aaCCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACggg‑‑‑g                                                                                                                           >  7:311657/1‑56 (MQ=255)                                                                                                                  aaCCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGTg                               >  4:163645/1‑148 (MQ=255)                                                                                                                     cGCACGTGTGCGGCCTGTCACTCCGGGCAGTTGCCACAGGCACCCAGTCGGG‑‑‑GTGAGCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTTGTGTAGCACGTGACCCAGGGTTTAAAGGCTATGCCGCCGCGTGGAtt                           <  2:188100/149‑1 (MQ=255)                                                                                                                        aCGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCCTGGATtgtg                        <  2:25766/149‑1 (MQ=255)                                                                                                                             tgCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGGCCCGCACCCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGTGGATTGTGCa                      <  1:124217/149‑1 (MQ=255)                                                                                                                                     gTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGTGGATTGTGCATGGACTGCAGt           >  4:20701/1‑149 (MQ=255)                                                                                                                                       cacaCCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGgc                                                                                             <  5:306555/65‑1 (MQ=255)                                                                                                                                       cacaCCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGgc                                                                                             >  6:306555/1‑65 (MQ=255)                                                                                                                                          acCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAg                                                                                        >  1:67468/1‑67 (MQ=255)                                                                                                                                          acCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAg                                                                                        <  2:67468/67‑1 (MQ=255)                                                                                                                                           ccGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGTGGATTGTGCATGGACTGCAGTGCCGAg     <  3:251683/149‑1 (MQ=255)                                                                                                                                            tcccatgcTGCC‑CGGTCACCCCGTCTGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGTGGATTGTGCATGGACTGCAGTGCCGAGGa   <  5:28440‑M1/141‑1 (MQ=255)                                                                                                                                              ccatgcTGCC‑CGGTCACCCCGTCTGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGTGGATTGTGCATGGACTGCAGTGCCGAGGAc  >  6:28440‑M1/7‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GCGCGGCCCCCAACCCTGAAGGTCGTTCCGCATGGCGAAATGGCTGCTTGCTGTCGGTATGTTCCTGCCGTTTTTCAGCGCACAGGCTACACAGGATCCCGA‑GGTGTTGTACAACCGCACGTGTGCGGCCTGTCACACCGGGCAGTTGCCACAGGCACCCAGACGGG‑‑‑GTGACCGGGCAGCATGGGAGCCAAGGCTGGCGCAAGGCATGGATGTACTGGTGAAGCACGTGACCCAGGGTTTCAAGGCTATGCCGCCGCGTGGATTGTGCATGGACTGCAGTGCCGAGGAC  >  NC_002947/131444‑131732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.