New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1733801 =	50 (0.850)	3 (0.050)	3/248	NT	5.8%	coding (69/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1733847 =	50 (0.880)					coding (23/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase

TTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCTTTCCTAACGATGCAGGCCAAGGGC  >  NC_002947/1733657‑1733947                                                                                                                                                 |                                                                                                                                                   atgttcataccccaaaaaaccggcgcgcattatatgccagtgcgcccttggcctgcatcgttaggaaagagactgccaaccctgctttaatgtcctatcacttccacatgaatggacgacgatgtcttcacgtaaattcggcctGAAcc                                                                                                                                                <  2:343665‑M1/5‑1 (MQ=255)    cTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCgg                                                                                                                                             <  6:376752/149‑1 (MQ=255)     tCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGt                                                                                                                                            <  4:158099/149‑1 (MQ=255)             caaaaaaccggcgcgcattatatgccagtgcgcccttggcctgcatcgttaggaaagagactgccaaccctgctttaatgtcctatcacttccacatgaatggacgacgatgtcttcacgtaaattcggcctGAAc                                                                                                                                                 >  1:180935‑M1/133‑136 (MQ=255)             caaaaaaccggcgcgcattatatgccagtgcgcccttggcctgcatcgttaggaaagagactgccaaccctgctttaatgtcctatcacttccacatgaatggacgacgatgtcttcacgtaaattcggcctGAAc                                                                                                                                                 <  2:180935‑M1/4‑1 (MQ=255)                gcgcATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTgcgg                                                                                                                                 >  2:322685/1‑149 (MQ=255)                gcgcATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTgc                                                                                                                                   <  6:154248/147‑1 (MQ=255)                         gtcgtcAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGCCCGGGCGGTTGATCAGTGCCCAGAGCCCGGTGAACCGTGCGGCGATGGc                                                                                                                          >  5:285654/1‑147 (MQ=255)                         gtcgtcAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGc                                                                                                                          >  2:214253/1‑147 (MQ=255)                         gtcgtcAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCa                                                                                                                        >  1:339118/1‑149 (MQ=255)                                     gTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCa                                                                                                            <  2:49719/149‑1 (MQ=255)                                       aCTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAgg                                                                                                          >  8:283704/1‑149 (MQ=255)                                          gACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGtt                                                                                                        >  6:100655/1‑148 (MQ=255)                                           aCCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTc                                                                                                       <  7:24774/148‑1 (MQ=255)                                             cccttggcctgcatcgttaggaaagagactgccaaccctgctttaatgtcctatcacttccacatgaatggacgacgatgtcttcacgtaaattcggcctGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAgg                                                                                                    >  1:223053‑M1/101‑149 (MQ=255)                                             ccTTCTGTGGGCTTTCGCCCAGGAGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAgg                                                                                                    >  6:76910/1‑149 (MQ=255)                                                    tgGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAAt                                                                                              <  7:174911/148‑1 (MQ=255)                                                      ggCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTa                                                                                           >  6:133901/1‑149 (MQ=255)                                                       gCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTAc                                                                                          <  1:322685/149‑1 (MQ=255)                                                           tCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTTTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGt                                                                                        <  4:321246/147‑1 (MQ=255)                                                              cccAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGa                                                                                   >  7:157832/1‑149 (MQ=255)                                                               ccAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAgcc                                                                                                   >  2:127810/1‑130 (MQ=255)                                                                ggaaagagactgccaaccctgctttaatgtcctatcacttccacatgaatggacgacgatgtcttcacgtaaattcggcctGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAg                                                                                                     >  1:297208‑M1/82‑129 (MQ=255)                                                                ggaaagagactgccaaccctgctttaatgtcctatcacttccacatgaatggacgacgatgtcttcacgtaaattcggcctGAACCCGGAGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAg                                                                                                     <  2:297208‑M1/48‑1 (MQ=255)                                                                  ggCGGAACGGCGAATACGAAAAGCCAGAGATATGTTCTGGCCAGGCGGGCGCGGAGACCGGGCGGTTGATCACTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCCGGCCGAATTTACGTGAAGACAtc                                                                               >  6:304999/1‑149 (MQ=255)                                                                     ggAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACAtcgtc                                                                            <  1:372509/149‑1 (MQ=255)                                                                      gAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACAtcgtcg                                                                           >  1:180543/1‑149 (MQ=255)                                                                           gCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCAt                                                                      <  4:264413/149‑1 (MQ=255)                                                                           gCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGAGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCAt                                                                      >  5:262635/1‑149 (MQ=255)                                                                            cGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCAtt                                                                     <  5:100655/149‑1 (MQ=255)                                                                                   gAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGAt                                                                                                                             <  6:132488/86‑1 (MQ=255)                                                                                   gAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGAt                                                                                                                             >  5:132488/1‑86 (MQ=255)                                                                                   gAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAg                                                                                                           >  4:98847/1‑104 (MQ=255)                                                                                   gAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCAtgtg                                                               >  2:137492/1‑148 (MQ=255)                                                                                    aaaaGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCAGTCATGTgg                                                              >  7:131949/1‑148 (MQ=255)                                                                                          cAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGaa                                                            <  7:289430/144‑1 (MQ=255)                                                                                          cAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGaa                                                            >  8:289430/1‑144 (MQ=255)                                                                                           agagATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATa                                                      <  5:76910/149‑1 (MQ=255)                                                                                           agagATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATa                                                      <  2:180543/149‑1 (MQ=255)                                                                                              gaTCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAgg                                                    <  6:363489/148‑1 (MQ=255)                                                                                                  tGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATcgtcgt                                                                          <  4:131981/122‑1 (MQ=255)                                                                                                  tGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATcgtcgt                                                                          >  3:131981/1‑122 (MQ=255)                                                                                                  tGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACAt                                                >  3:337391/1‑148 (MQ=255)                                                                                                         gCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAATGATa                                                      >  1:225200/1‑135 (MQ=255)                                                                                                         gCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAATGATa                                                      <  2:225200/135‑1 (MQ=255)                                                                                                          cgaGGCGGGGGCGGAGACCGGGCGGTTGATCATTGACCAGAACCCGGTGAACAGTGCTGCGATGGCCAGCACCACTACCAGGTTCAGGCCGATTTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCatg                                       <  2:339118/147‑3 (MQ=255)                                                                                                          ccAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCAGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGGCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAgg                                       <  8:157832/149‑1 (MQ=255)                                                                                                           cAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAggg                                      >  4:88800/1‑149 (MQ=255)                                                                                                                 ggggCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCa                                <  1:137492/149‑1 (MQ=255)                                                                                                                      ggAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGtctc                           <  5:133901/149‑1 (MQ=255)                                                                                                                         gaCCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCttt                        <  1:146939/149‑1 (MQ=255)                                                                                                                          aCCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCTTTc                       <  1:214253/149‑1 (MQ=255)                                                                                                                                       tCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGa                                                        >  7:337464/1‑103 (MQ=255)                                                                                                                                       tCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGa                                                        <  8:337464/103‑1 (MQ=255)                                                                                                                                       tCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCTTTCCTAACGATGCAgg          >  6:372909/1‑149 (MQ=255)                                                                                                                                       tCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCTTTCCTAACGATGCAg           <  7:283704/148‑1 (MQ=255)                                                                                                                                             cccAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCTTTCCTAACGATGCAGGCCAAgg    >  4:319204/1‑149 (MQ=255)                                                                                                                                               cAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCTTTCCTAACGATGCAGGCCAAGGgc  >  1:41725/1‑149 (MQ=255)                                                                                                                                               cAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCTTTCCTAACGATGCAGGCCAAGGgc  >  1:343665/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                   TTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAGAGATCTGTTCTGGCCAGGCGGGGGCGGAGACCGGGCGGTTGATCAGTGCCCAGAACCCGGTGAACAGTGCGGCGATGGCCAGCACCACTACCAGGTTCAGGCCGAATTTACGTGAAGACATCGTCGTCCATTCATGTGGAAGTGATAGGACATTAAAGCAGGGTTGGCAGTCTCTTTCCTAACGATGCAGGCCAAGGGC  >  NC_002947/1733657‑1733947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.