New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1839126 | 43 (0.730) | 4 (0.070) | 4/246 | NT | 8.2% | coding (43/606 nt) | PP_1644 | NAD(P)H dehydrogenase |
? | NC_002947 | = 1839157 | 48 (0.860) | coding (12/606 nt) | PP_1644 | NAD(P)H dehydrogenase |
TGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTGGGGTGCTGGGCCATGGCCTCGA > NC_002947/1838982‑1839274 | tGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATgg < 2:11841/149‑1 (MQ=255) ggCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATggc < 2:337245/149‑1 (MQ=255) gCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATggcg > 8:19643/1‑149 (MQ=255) cgcCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATa > 7:139861/1‑148 (MQ=255) gcCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATggcggc > 1:285962/1‑140 (MQ=255) gcCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATggcggc < 2:285962/140‑1 (MQ=255) tGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCctacatcctggtgctgtatta > 8:317514‑M1/1‑127 (MQ=255) gCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAg > 3:246239/1‑149 (MQ=255) gAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATg < 4:236027/149‑1 (MQ=255) atatCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTa < 7:353759/149‑1 (MQ=255) tatCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAg < 6:162796/149‑1 (MQ=255) tatCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAg > 5:162796/1‑149 (MQ=255) ggCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGgcgcgc < 7:281387/149‑1 (MQ=255) gCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCctacatcctggtgctgtattacagccgccatggcgcgac < 7:317514‑M1/149‑40 (MQ=255) cACCGCTTCGCATTCGGTGGAAATAGCCGGGACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGggc < 1:31164‑M2/142‑4 (MQ=255) cACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGggc > 2:31164‑M2/1‑139 (MQ=255) ccGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACg > 7:153262/1‑149 (MQ=255) cTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGTTACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCa < 8:36141/149‑1 (MQ=255) cATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCa > 5:259255/1‑99 (MQ=255) cATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCa < 6:259255/99‑1 (MQ=255) aTTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAg > 7:15883/1‑144 (MQ=255) aTTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAg < 8:15883/144‑1 (MQ=255) tCGGTGGAAATAGCAGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGAtctc < 8:242442/148‑1 (MQ=255) ggTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCACTGGTCGCGCCctacatcctggtgctgtattacagccgccatggcgcgacca > 2:338834‑M1/1‑93 (MQ=255) ggTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCACTGGTCGCGCCctacatcctggtgctgtattacagccgccatggcgcgacca < 1:338834‑M1/134‑42 (MQ=255) cGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCggcgggcg < 8:139861/149‑1 (MQ=255) cgcAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGcgacc < 4:246239/148‑1 (MQ=255) cAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGcgaccgac < 7:206957/149‑1 (MQ=255) gcgcCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACgg > 4:160872/1‑149 (MQ=255) gcCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGt < 1:29173/91‑1 (MQ=255) gcCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGt > 2:29173/1‑91 (MQ=255) cTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCtt > 3:21717/1‑149 (MQ=255) cTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCtt < 7:19643/149‑1 (MQ=255) cTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCtt < 5:163326/149‑1 (MQ=255) gCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACg < 1:88505/138‑1 (MQ=255) gCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACg > 2:88505/1‑138 (MQ=255) tCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAg > 8:276765/1‑148 (MQ=255) aTACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATc > 8:175782/1‑149 (MQ=255) tACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACTAGGATCg > 2:237406/1‑149 (MQ=255) gggCGATGTGCCGGGCCATTTAGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCAGtt > 1:159256/1‑149 (MQ=255) gtgCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCa < 2:159256/148‑1 (MQ=255) gtgCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCa < 4:21717/148‑1 (MQ=255) gCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGtt > 5:129885/1‑149 (MQ=255) ccGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGttt < 7:175782/149‑1 (MQ=255) cGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTg > 4:245532/1‑149 (MQ=255) ggCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTggg > 2:84284/1‑149 (MQ=255) gCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTgggg > 8:104970/1‑149 (MQ=255) cATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCATCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCAGGCAACCAGGATCGGCCGTTCGATCAGTTTGGGGTg > 5:373920/1‑149 (MQ=255) ttCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGAt < 7:267275/134‑1 (MQ=255) ttCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGAt > 8:267275/1‑134 (MQ=255) cGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTGGGGTGCTgg < 1:84284/148‑1 (MQ=255) tGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGggcgcgaccagtgaaatggcccggcacatcgcccgcggtatcgagctggccggcatggaggcgcgtctgcgcacggtgccggctatttccacc < 1:338834‑M2/134‑94 (MQ=255) tGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGggcgcgaccagtgaaatggcccggcacatcgcccgcggtatcgagctggccggcatggaggcgcgtctgcgcacggtgccggctatttccacc > 2:338834‑M2/1‑41 (MQ=255) gTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGggcgcgaccagcgaaatggcccggcacatcgcccgcggtatcgagctggccggcatggaggcgcgtctgcgcacggtgccggctatttccaccgaatgcgaagcggtggc < 7:317514‑M2/149‑111 (MQ=255) gTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTGGGGTGCTGGGCCATg < 7:104970/149‑1 (MQ=255) gTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGAAACCAGGATCGGCCGTTCGATCAGTTTGGGGTGCTGGGCCATg < 7:183084/149‑1 (MQ=255) gcgcCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTGGGGTGCTGGGCCATGGcc > 4:342271/1‑149 (MQ=255) gcCctacatcctggtgctgtattacagccgccatggcgcgaccagcgaaatggcccggcacatcgcccgcggtatcgagctggccggcatggaggcgcgtctgcgcacggtgccggctatttccaccgaatgcgaagcggtg > 2:31164‑M1/1‑3 (MQ=255) gcCctacatcctggtgctgtattacagccgccatggcgcgaccagcgaaatggcccggcacatcgcccgcggtatcgagctggccggcatggaggcgcgtctgcgcacggtcccggctatttccaccgaatgcgaagcggtg < 1:31164‑M1/142‑140 (MQ=255) ccATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTGGGGTGCTGGGCCATGGCCTc > 5:24310/1‑148 (MQ=255) cATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTGGGGTGCTGGGCCATGGCCTCGa < 3:160872/149‑1 (MQ=255) | TGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCGGCACCGTGCGCAGACGCGCCTCCATGCCGGCCAGCTCGATACCGCGGGCGATGTGCCGGGCCATTTCGCTGGTCGCGCCATGGCGGCTGTAATACAGCACCAGGATGTAGGGCGCGCTCACGGCAGGATCTCCAGCACCTTTTCCGGCGGGCGACCGACCACGGCCTTGTCGCCGGCAACCAGGATCGGCCGTTCGATCAGTTTGGGGTGCTGGGCCATGGCCTCGA > NC_002947/1838982‑1839274 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |