New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1843419	61 (1.040)	4 (0.070)	4/246	NT	6.3%	coding (1375/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 1843446	60 (1.070)					coding (1348/2754 nt)	gacS	sensor protein GacS

CTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCGTTGCTGAC  >  NC_002947/1843271‑1843566                                                                                                                                                      |                                                                                                                                                     cTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTG                                                                                                                                                      <  5:218945‑M1/149‑1 (MQ=255) cTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTG                                                                                                                                                      <  7:219390‑M1/149‑1 (MQ=255)        aGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAgt                                                                                                                                               <  3:318112/149‑1 (MQ=255)           aCTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAgtgt                                                                                                                                             <  2:173378/148‑1 (MQ=255)             tGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTgcg                                                                                                                                          >  2:183129/1‑149 (MQ=255)             tGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCAGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGtcacctcaggat                                                                                                                                          >  3:279556‑M1/1‑137 (MQ=255)               cGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTgcgc                                                                                                                                         <  8:116742/148‑1 (MQ=255)                 aaCCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGcaca                                                                                                                                      >  5:12553/1‑149 (MQ=255)                 aaCCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGcaca                                                                                                                                      >  6:162291/1‑149 (MQ=255)                 aaCCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCAATCTCTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGCGCTCGCGGGCC‑AGTGAGATGTCAGCCTGGCTGAAGCCCTGGAACAGAGTGCGcac                                                                                                                                       >  2:359540/1‑148 (MQ=255)                            ggggTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGa                                                                                                                           <  1:183129/149‑1 (MQ=255)                              ggTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGa                                                                                                                           >  5:218219/1‑147 (MQ=255)                               gTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCAGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGtcacctcaggatgtgcgcacactgttccag                                                                                                                        <  4:279556‑M1/149‑31 (MQ=255)                                tACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGtcacctcaggatgtgcgcacactgttccagg                                                                                                                       <  1:330141‑M1/149‑32 (MQ=255)                                   tGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGAcaggcc                                                                                                                     <  7:198807‑M2/148‑7 (MQ=255)                                     tCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGtcacctcaggatgtgcgcacactgttccaggccttc                                                                                                                  <  2:258546‑M1/149‑37 (MQ=255)                                       gACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGc                                                                                                                <  5:37191/149‑1 (MQ=255)                                       gACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGAGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGc                                                                                                                <  3:88880/149‑1 (MQ=255)                                         cacCGATCTCGCCGCCCATCTGATCGATCAGGCGCTTGGAAATCACCAGCCCCTGACCGGCGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTTTGCGCACATCCTGAGGTGACAGGCCGATGCC‑g                                                                                                             <  3:201440/149‑1 (MQ=255)                                          acCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGc                                                                                                                <  2:51021/146‑1 (MQ=255)                                          acCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGc                                                                                                                >  1:51021/1‑146 (MQ=255)                                           ccGCTCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑Ggt                                                                                                           <  2:256041/149‑1 (MQ=255)                                            cGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑Ggtg                                                                                                          >  6:178394/1‑149 (MQ=255)                                            cGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑Ggtg                                                                                                          >  4:257938/1‑149 (MQ=255)                                              aTCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTc                                                                                                        >  6:56804/1‑149 (MQ=255)                                                         cATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGa                                                                                             >  4:33829/1‑149 (MQ=255)                                                               ttCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATgcgc                                                                                        >  5:151826/1‑148 (MQ=255)                                                               ttCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATg                                                                                           <  5:162291/145‑1 (MQ=255)                                                                      aGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTgcgc                                                                                <  5:178394/149‑1 (MQ=255)                                                                        gcgcTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTgcgcg                                                                               >  4:230780/1‑148 (MQ=255)                                                                        gcgcTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTgcgcg                                                                               <  3:230780/148‑1 (MQ=255)                                                                          gcTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAg                                                                            >  8:336353/1‑149 (MQ=255)                                                                                     aCCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCCAAGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCt                                                                  >  1:66950/1‑149 (MQ=255)                                                                                     aCCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTc                                                                 >  7:248627/1‑149 (MQ=255)                                                                                     aCCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑ACAGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATACTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCCCGCAGTCTTCGTGCTc                                                                 >  8:71815/1‑149 (MQ=255)                                                                                         gCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCt                                                             <  8:248627/149‑1 (MQ=255)                                                                                          cgccAGCCCGGCGGCACCGGTCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCtt                                                            >  1:290071/3‑149 (MQ=255)                                                                                          ccccAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCtt                                                            >  8:35371/1‑149 (MQ=255)                                                                                            ccAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTcc                                                          <  3:257938/149‑1 (MQ=255)                                                                                            ccAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTc                                                           >  2:338690/1‑148 (MQ=255)                                                                                               gACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAg                                                        >  6:325747/1‑148 (MQ=255)                                                                                                aCCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCa                                                      >  7:334534/1‑149 (MQ=255)                                                                                                aCCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCa                                                      <  6:218219/149‑1 (MQ=255)                                                                                                        cgccgGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGgcgcgc                                              <  5:56804/149‑1 (MQ=255)                                                                                                         gccgGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCa                                             <  7:35371/149‑1 (MQ=255)                                                                                                             ggCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCacgac                                         >  3:87832/1‑149 (MQ=255)                                                                                                                tGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGAt                                      >  7:292181/1‑149 (MQ=255)                                                                                                                 ggCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATg                                     >  7:82564/1‑149 (MQ=255)                                                                                                                    gggCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGAt                                                                                            <  6:348211/91‑1 (MQ=255)                                                                                                                    gggCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTg                                  <  4:87832/149‑1 (MQ=255)                                                                                                                    gggCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCA‑GGTGTCCTGCACGCTGAt                                                                                            >  5:348211/1‑91 (MQ=255)                                                                                                                        c‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCtt                              <  8:82564/149‑1 (MQ=255)                                                                                                                           gTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTcg                            >  6:12458/1‑149 (MQ=255)                                                                                                                            tGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTcgc                           <  2:290071/149‑1 (MQ=255)                                                                                                                              aGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTcgctg                         <  6:151826/149‑3 (MQ=255)                                                                                                                              aGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCgg                         <  3:33829/149‑1 (MQ=255)                                                                                                                                ttGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCa                                                         >  3:335414/1‑115 (MQ=255)                                                                                                                                ttGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCa                                                         <  4:335414/115‑1 (MQ=255)                                                                                                                                      gCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCCTAGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACt                  >  1:287858/1‑149 (MQ=255)                                                                                                                                         tGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGAt              >  6:336429/1‑149 (MQ=255)                                                                                                                                           gCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCTGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGAt              <  6:12553/147‑1 (MQ=255)                                                                                                                                             tGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCg          >  8:260948/1‑149 (MQ=255)                                                                                                                                              gAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGAcaggccttcagccaggctgacaactcactggcccgccagcccggcggcaccggtctggggctggtgatttccaagcgcctgatcgaacagatgggcggcgagatcggtgtcga          <  2:258546‑M2/149‑114 (MQ=255)                                                                                                                                               aaGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATg                                     <  4:178236/120‑1 (MQ=255)                                                                                                                                               aaGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATg                                     >  3:178236/1‑120 (MQ=255)                                                                                                                                               aaGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCGtt        <  8:292181/149‑1 (MQ=255)                                                                                                                                                 ggCCTGtcacctcaggatgtgcgcacactgttccaggccttcagccaggctgacaactcactggcccgccagcccggcggcaccggtctggggctggtgatttccaagcgcctgatcgaacagatgggcggcgagatcggtgtcgaca        <  7:198807‑M1/148‑143 (MQ=255)                                                                                                                                                 ggCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCGTTGc      <  5:325747/149‑1 (MQ=255)                                                                                                                                                 ggCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCGTTGc      <  7:336353/149‑1 (MQ=255)                                                                                                                                                 ggCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCGTTGc      >  5:35986/1‑149 (MQ=255)                                                                                                                                                   ccTGGAACAGTGTGCGCACATCCTGAGGTGAcaggccttcagccaggctgacaactcactggcccgccagcccggcggcaccggtctggggctggtgatttccaagcgcctgatcgaacagatgggcggcgagatcggtgtcgacagta     <  1:330141‑M2/149‑119 (MQ=255)                                                                                                                                                    cTGGAACAGTGTGCGCACATCCTGAGGTGAcaggccttcagccaggctgacaactcactggcctgccagcccggcggcaccggtctggggctggtgatttccaagcgcctgatcgaacagatgggcggcgagatcggtgtcgacagtac    <  4:279556‑M2/149‑120 (MQ=255)                                                                                                                                                     tGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCGTTGCTGAc  >  8:243007/1‑149 (MQ=255)                                                                                                                                                      ggAACAGTGTGCGCGCATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCGTTGCTGAc  >  7:319842/1‑148 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTGTTCGATCAGGCGCTTGGAAATCACCAGCCCCAGACCGGTGCCGCCGGGCTGGCGGGCC‑AGTGAGTTGTCAGCCTGGCTGAAGGCCTGGAACAGTGTGCGCACATCCTGAGGTGACAGGCCGATGCC‑GGTGTCCTGCACGCTGATGCGCAACTGCGCGCAGTCTTCGTGCTCGTCTTCCAGCATGGCGCGCACGACGATGGTGCCTTCGCGGGTGAACTTGATGGCGTTGCTGAC  >  NC_002947/1843271‑1843566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.