New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3577425 =	42 (0.710)	7 (0.130)	6/230	NT	15.8%	intergenic (+19/‑161)	PP_3157/PP_3158	inositol monophosphatase family protein/hypothetical protein
	?	NC_002947	3577480 =	37 (0.710)					intergenic (+74/‑106)	PP_3157/PP_3158	inositol monophosphatase family protein/hypothetical protein

CATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCGG  >  NC_002947/3577277‑3577562                                                                                                                                                     |                                                                                                                                             caggcgggggaggaaattcgcgtagcttgcaaccatcggcaccgggtcgatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcg                                                                                                                                              >  6:185063‑M1/149‑149 (MQ=255)  atcGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGAGGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTg                                                                                                                                              <  7:260927/148‑1 (MQ=255)   tcGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGc                                                                                                                                            >  2:102192/1‑149 (MQ=255)            ggaaattcgcgtagcttgcaaccatcggcaccgggtcgatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTcgcg                                                                                                                                   <  8:49144‑M1/12‑1 (MQ=255)             gggTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCgg                                                                                                                                  <  4:203090/149‑1 (MQ=255)               gTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGc                                                                                                                                <  3:354645/149‑1 (MQ=255)               gTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGGGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGc                                                                                                                                <  5:45763/149‑1 (MQ=255)               gTGGCGTGATCACGGCGTGGGATGGCAGTCCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGc                                                                                                                                <  2:241142/149‑1 (MQ=255)                   cGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGt                                                                                                                            >  8:58723/1‑149 (MQ=255)                            ggCGTGGGATGGCAGTTTGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTtg                                                                                                                   >  4:170223/1‑149 (MQ=255)                                   atcggcaccgggtcgatattgggcggctgcgccgggactcagcgccgcctggccaagcatagagcccgaaaatgcgaaaaagtgcggtggctggacagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTGTTGTGggacc                                                                                                            <  5:108587‑M1/35‑3 (MQ=255)                                       gCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGt                                                                                                        >  5:267924/1‑149 (MQ=255)                                           ttCGGCGCCGGTGGGCGGGGGTGGGGGGGCCTGTGGTGACCCTGGGCTGCTTGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCGTGGCTTCTTCTCGGGCGAGTCCCTTCTTGTGGGAGCgg                                                                                                          <  7:237092/143‑1 (MQ=255)                                                 gcAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGaa                                                                                            <  2:255695/149‑1 (MQ=255)                                                 gcAGGATGGCGGGGGTGTGGTGGCCGTTGGTGAACCTGTGCTTCATGCGCAGGTGGTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGaa                                                                                            <  2:260813/149‑1 (MQ=255)                                                 gatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGaa                                                                                            >  5:195949‑M1/101‑149 (MQ=255)                                                   aGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGaa                                                                                            >  3:353209/1‑147 (MQ=255)                                                    ggATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAagag                                                                                         <  5:86983/149‑1 (MQ=255)                                                     ttgggcggcgccgccgggagtcagcgcggcctggccaagcattgtgcccgaatatgggaaaaagtgcggtgtctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAagag                                                                                         >  6:108587‑M1/97‑148 (MQ=255)                                                     gATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAgg                                                                                        <  7:160427/149‑1 (MQ=255)                                                                 gccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAag                                                                                           <  8:95423‑M1/50‑1 (MQ=255)                                                                 gccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAag                                                                                           >  7:95423‑M1/85‑134 (MQ=255)                                                                    gtggCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTg                                                                          >  4:148050/1‑148 (MQ=255)                                                                    gtggCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTg                                                                          >  2:29985/1‑148 (MQ=255)                                                                     tggCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCAGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCa                                                                        <  1:102192/149‑1 (MQ=255)                                                                     ggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCgg                                                                                                                                  <  4:358261‑M1/13‑1 (MQ=255)                                                                     ggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCgg                                                                                                                                  <  4:324940‑M1/13‑1 (MQ=255)                                                                     ggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCgg                                                                                                                                  >  3:358261‑M1/81‑93 (MQ=255)                                                                     ggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCgg                                                                                                                                  >  3:324940‑M1/81‑93 (MQ=255)                                                                          tgtgGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATtctc                                                                   >  3:273366/1‑149 (MQ=255)                                                                                  cccTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTc                                                                                                                                      >  8:324907/1‑76 (MQ=255)                                                                                  cccTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTc                                                                                                                                      <  7:324907/76‑1 (MQ=255)                                                                                   ccTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCAc                                                          >  8:194661/1‑149 (MQ=255)                                                                                   ccTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCAc                                                          <  7:58723/149‑1 (MQ=255)                                                                                     tgtgCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑g                                                       >  8:170209/1‑149 (MQ=255)                                                                                      gtgCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCc‑‑gc                                                                                               >  7:65109/1‑109 (MQ=255)                                                                                      gtgCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCc‑‑gc                                                                                               <  8:65109/109‑1 (MQ=255)                                                                                       tgctgcATGCGCAGGTGCTCGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCTGGCGAGTCCCAACTTGTGGCTGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCCGCCACC‑CCa                                                     >  4:16156/1‑149 (MQ=255)                                                                                        caagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGaa                                                                                            >  3:212481‑M1/62‑110 (MQ=255)                                                                                        caagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGaa                                                                                            <  4:212481‑M1/49‑1 (MQ=255)                                                                                         ctgcATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCAc                                                    <  7:170209/148‑1 (MQ=255)                                                                                           gcgcatgcAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACttt                                                 >  5:129163/7‑149 (MQ=255)                                                                                            cATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACtttt                                                >  8:58626/1‑149 (MQ=255)                                                                                              tGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTc                                              <  3:148050/149‑1 (MQ=255)                                                                                                        cTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTGTCCAGCCACC‑GCACTTTTTCCCATTTTCgg                                    <  1:29985/149‑1 (MQ=255)                                                                                                           gagaTGTTGCGCCACGCCATGTGATCCGGGTTCTTAGCTCCTGGCCTCTTCGCGGGCGAGGCCCTTCTTGTGGTAGAGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGATTGAATTCTCTCCAGCCACC‑GCACTTTTTCCCAATTTCGGGc                                  >  2:226565/1‑148 (MQ=255)                                                                                                               tGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGctct                               <  6:267924/147‑1 (MQ=255)                                                                                                                gTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTAt                             <  4:353209/148‑1 (MQ=255)                                                                                                                    cgccacgccaTGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTATGCTTg                        <  3:170223/149‑1 (MQ=255)                                                                                                                      ccacgccaTGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAATAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTc                                              <  1:140534/125‑1 (MQ=255)                                                                                                                      ccacgccaTGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTc                                              >  2:140534/1‑125 (MQ=255)                                                                                                                                tgATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCgcgc            <  7:194661/149‑1 (MQ=255)                                                                                                                                    ccGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCAGGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCt           >  1:106424/1‑148 (MQ=255)                                                                                                                                      gggTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGGTCCTATTAACAATTTTCGGGCGCTATGATTGGCCAGGCCGCCATGACt       >  1:124363/1‑149 (MQ=255)                                                                                                                                         ttcttcGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCg   >  1:47982/1‑149 (MQ=255)                                                                                                                                          tcttcGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCgg  >  7:49144/1‑149 (MQ=255)                                                                                                                                           cttcGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCgg  <  7:58626/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                             CATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCC‑‑GCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACC‑GCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCGG  >  NC_002947/3577277‑3577562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.