New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 529676062 (1.050)3 (0.050) 3/252 NT 5.4% coding (603/1272 nt) TpbB diguanylate cyclase
?NC_002947 = 5296804 44 (0.770)coding (559/1272 nt) TpbB diguanylate cyclase

GTGGCTGGCCTGATGGGCCAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGCCAAGCCACTGAGCAGGAACAGC  >  NC_002947/5296613‑5296907
                                                                                                                                                   |                                                                                                                                                   
gTGGCTGGCCTGATGGGCCAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCt                                                                                                                                                    >  7:352701/1‑149 (MQ=255)
     tggcCTGATGGGCCAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCgcgg                                                                                                                                               >  6:368007/1‑149 (MQ=255)
       gcCTGATGGGCCAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCgcggcg                                                                                                                                             <  1:273001/149‑1 (MQ=255)
            aTGGGCCAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGgcgggcgg                                                                                                                                        <  3:152841/149‑1 (MQ=255)
               ggCCAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCa                                                                                                                                      <  6:40441/148‑1 (MQ=255)
                gCCAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATg                                                                                                                                    >  4:45300/1‑149 (MQ=255)
                 ccAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATgg                                                                                                                                   >  5:273014/1‑149 (MQ=255)
                   aGGGGCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCCGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGc                                                                                                                                 <  5:200800/149‑1 (MQ=255)
                     ggTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGa                                                                                                                               <  6:273014/149‑1 (MQ=255)
                      gTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGa                                                                                                                               >  4:161064/1‑148 (MQ=255)
                       tCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGaca                                                                                                                             >  2:260221/1‑149 (MQ=255)
                       tCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGaca                                                                                                                             >  6:236250/1‑149 (MQ=255)
                        cTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGAGGGCGGCATGGGCGacac                                                                                                                            >  3:111677/1‑149 (MQ=255)
                           gTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTg                                                                                                                          <  3:26368/148‑1 (MQ=255)
                                  ctctGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTggccaggcc                                                                                                                  >  8:274311/1‑149 (MQ=255)
                                  ctctGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTCTTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTggccacgc                                                                                                                   >  5:375104/1‑148 (MQ=255)
                                     tGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCACCGGTCGAAGCTGCGCccgctgcgtggcctggccagtgtcgcccatgccgcccg                                                                                                               >  7:160759‑M1/1‑111 (MQ=255)
                                          gTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAgcg                                                                                                          >  4:281868/1‑149 (MQ=255)
                                             gCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCccgctgcgtggcctggccagtgtcgcccatgccgcccgccgcgag                                                                                                        <  4:5712‑M1/148‑46 (MQ=255)
                                             gCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCACCGGTCGAAGCTGCGCccgctgcgtggcctggccagtgtcgcccatgccgcccgccgcgagc                                                                                                       <  8:160759‑M1/149‑47 (MQ=255)
                                              cTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTGCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGgcg                                                                                                      >  5:194068‑M2/1‑146 (MQ=255)
                                               tATGCCACACCTCCAGTTCATCCAGCAGGGCATTGGAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAgcgggcgg                                                                                                     >  5:277053/1‑149 (MQ=255)
                                                 tGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAgcgggcgg                                                                                                     <  5:236250/147‑1 (MQ=255)
                                                 tGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAgcgggcgg                                                                                                     <  8:352701/147‑1 (MQ=255)
                                                 tGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGcgggcggg                                                                                                    <  7:283908/148‑1 (MQ=255)
                                                 tGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGt                                                                                                   <  5:42247/149‑1 (MQ=255)
                                                 tGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGt                                                                                                   <  3:161064/149‑1 (MQ=255)
                                                   ccACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTg                                                                                                  <  7:96166/148‑1 (MQ=255)
                                                        ccTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCg                                                                                            <  3:281868/149‑1 (MQ=255)
                                                          tCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGt                                                                                                   <  8:160429/140‑1 (MQ=255)
                                                          tCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGt                                                                                                   >  7:160429/1‑140 (MQ=255)
                                                              gTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAg                                                                                       >  2:275544/1‑148 (MQ=255)
                                                                           ggCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGgcgggcgg                                                                                                                                        <  6:303950/86‑1 (MQ=255)
                                                                           ggCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCTGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACa                                                                         <  1:260221/149‑1 (MQ=255)
                                                                           ggCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACa                                                                         <  3:45300/149‑1 (MQ=255)
                                                                            gCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAg                                                                        <  1:275544/149‑1 (MQ=255)
                                                                              aTTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGa                                                                       >  4:262146/1‑148 (MQ=255)
                                                                                tGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATa                                                                     <  4:111677/148‑1 (MQ=255)
                                                                                      cGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAgcgggcgg                                                                                                     >  4:354048/1‑110 (MQ=255)
                                                                                      cGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAgcgggcgg                                                                                                     <  3:354048/110‑1 (MQ=255)
                                                                                            ccAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGTGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAgg                                                        >  1:331888/1‑149 (MQ=255)
                                                                                            ccAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAgg                                                        >  8:167635/1‑149 (MQ=255)
                                                                                                cTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGgcgc                                                    >  4:14466/1‑149 (MQ=255)
                                                                                                    ttCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGTGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAg                                                <  2:331888/149‑1 (MQ=255)
                                                                                                    ttCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTggg                                                                <  1:360305/133‑1 (MQ=255)
                                                                                                    ttCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTggg                                                                >  2:360305/1‑133 (MQ=255)
                                                                                                         cTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCg                                           >  8:132190/1‑149 (MQ=255)
                                                                                                            ggCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTg                                         <  3:262146/148‑1 (MQ=255)
                                                                                                            ggCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGc                                        <  6:277053/149‑1 (MQ=255)
                                                                                                              cAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAg                                      <  7:132190/149‑1 (MQ=255)
                                                                                                               aaTCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAg                                      >  4:158562/1‑148 (MQ=255)
                                                                                                               aaTCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAg                                      >  5:22889/1‑148 (MQ=255)
                                                                                                                   ggCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACa                                  <  7:167635/148‑1 (MQ=255)
                                                                                                                      gcTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGa                               >  2:275424/1‑148 (MQ=255)
                                                                                                                        ttCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGt                                                                                                   <  3:71093/78‑1 (MQ=255)
                                                                                                                        ttCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGt                                                                                                   >  4:71093/1‑78 (MQ=255)
                                                                                                                           tGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCgg                         >  3:143261/1‑149 (MQ=255)
                                                                                                                             gTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGAcc                                            <  1:47603/128‑1 (MQ=255)
                                                                                                                             gTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGAcc                                            >  2:47603/1‑128 (MQ=255)
                                                                                                                               aCGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGcc                       >  1:322515/1‑147 (MQ=255)
                                                                                                                                cgcgCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGCCaa                     <  4:143261/148‑1 (MQ=255)
                                                                                                                                 gcgcCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACa                                  <  7:294301/134‑1 (MQ=255)
                                                                                                                                 gcgcCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACa                                  >  8:294301/1‑134 (MQ=255)
                                                                                                                                   gcCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGCCAAGCCa                 >  1:271268/1‑149 (MQ=255)
                                                                                                                                     cGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGCCAAGCCACt               <  2:271268/149‑1 (MQ=255)
                                                                                                                                          gAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGCCAAGCCACTGAGCa          <  4:315388/149‑1 (MQ=255)
                                                                                                                                              cTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTTATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGCCAAGCCACTGAGCAGGaa      <  7:274311/149‑1 (MQ=255)
                                                                                                                                                gcgcTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGCCAAGCCACTGAGCAGGaa      >  6:282154/1‑147 (MQ=255)
                                                                                                                                                 cgcccgctgcgtggcctggccagtgtcgcccatgccgcccgccgcgagcgcagcttcgaccggcgcgtaccagaagcgccgattgccgagctgcacgagctgggtaacgacttcaatgccctgctggatgaactggaggtgtggcatag   >  5:194068‑M1/1‑3 (MQ=255)
                                                                                                                                                  gcTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGgcgcagcttcgaccggtgcgtaccagaagcgccgattgccgagctgaacgagctgggtaacgacttcaatgccctgctggatgaactggaggtgtggcatagc  <  8:160759‑M2/149‑104 (MQ=255)
                                                                                                                                                   cTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGgcgcagcttcgaccggcgcgtaccagaagcgccgattgccgagctgaacgagctgggtaacgacttcaatgccctgctggatgaactggaggtgtggcatagc  <  4:5712‑M2/148‑104 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GTGGCTGGCCTGATGGGCCAGGGTCTGGTTTTCGCTCTGCAGGTGGCTATGCCACACCTCCAGTTCATCCAGCAGGGCATTGAAGTCGTTACCCAGCTCGTTCAGCTCGGCAATCGGCGCTTCTGGTACGCGCCGGTCGAAGCTGCGCTCGCGGCGGGCGGCATGGGCGACACTGGCCAGGCCACGCAGCGGGCGGGTGATATCGCTGAGCAGGCGCCGCGACAGATACTGGGCAGCCAGGGCGCTGAGGACCGTGCAGAACAGGATACCGGCCAAGCCACTGAGCAGGAACAGC  >  NC_002947/5296613‑5296907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.