New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5566146 =	53 (0.900)	5 (0.090)	4/242	NT	9.1%	coding (1340/1899 nt)	mutL	DNA mismatch repair protein MutL
	?	NC_002947	5566183 =	50 (0.910)					coding (1303/1899 nt)	mutL	DNA mismatch repair protein MutL

CGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGAGGGACGTGGGG  >  NC_002947/5565998‑5566290                                                                                                                                                     |                                                                                                                                                  tccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgcgttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaag                                                                                                                                                   <  2:366692‑M1/1‑1 (MQ=255) tccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgaggtctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaag                                                                                                                                                   <  2:372587‑M1/1‑1 (MQ=255)  ggCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTgcgc                                                                                                                                                  <  2:199227/149‑1 (MQ=255)  ccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaag                                                                                                                                                   >  1:220886‑M1/148‑148 (MQ=255)    aatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGc                                                                                                                                                  <  4:20907‑M1/2‑1 (MQ=255)      tggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCAgg                                                                                                                                              >  7:342707‑M1/144‑149 (MQ=255)      ccAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAgg                                                                                                                                              <  3:234889/149‑1 (MQ=255)          cagcGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATACTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCa                                                                                                                                           >  5:318763/1‑148 (MQ=255)             cGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGc                                                                                                                                       <  2:37848/149‑1 (MQ=255)                cTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTa                                                                                                                                   <  3:324025/149‑1 (MQ=255)                   gCCGCTCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCAGAGC‑CTAGCg                                                                                                                                >  4:317518/1‑149 (MQ=255)                        tCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCggggg                                                                                                                            >  3:65073/1‑148 (MQ=255)                            cagtatcaatacaccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCa                                                                                                                                                <  6:243883‑M1/4‑1 (MQ=255)                            cagtatcaatacaccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCa                                                                                                                                                >  5:243883‑M1/122‑125 (MQ=255)                            cagtatcaatacaccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCAGGGCATAGC‑CTAGCGGGGGAATGt                                                                                                                       <  4:290656‑M1/28‑1 (MQ=255)                                  gCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGcc                                                                                                                   <  4:65073/147‑1 (MQ=255)                                   cTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTg                                                                                                                <  5:137614/149‑1 (MQ=255)                                       ccatggccaCCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCtt                                                                                                            >  5:316801/1‑149 (MQ=255)                                        accccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCttt                                                                                                           <  3:295684‑M1/40‑1 (MQ=255)                                         ccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTc                                                                                                          >  4:295684‑M1/109‑149 (MQ=255)                                         ccccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTc                                                                                                          >  3:290656‑M1/109‑149 (MQ=255)                                          cccacgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCg                                                                                                         >  1:281354‑M1/108‑149 (MQ=255)                                             acgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCAGGGc                                                                                                                                            <  7:165688‑M1/8‑1 (MQ=255)                                             acgtccctcgcagccgctgccggccgcagaggcacaggcggtgtatcgcgagttctataagccgctggaaacaggtgctgcgcctgcgacggcactgcccgaaaGCCAGGGc                                                                                                                                            >  8:165688‑M1/105‑112 (MQ=255)                                                 cTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTc                                                                                                          >  3:113573/1‑141 (MQ=255)                                                 cTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTc                                                                                                          <  4:113573/141‑1 (MQ=255)                                                 cTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTg                                                                                                  >  4:29243/1‑149 (MQ=255)                                                         gcTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCa                                                                                          <  3:317518/149‑1 (MQ=255)                                                           tCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGACACCCTTGTGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAgg                                                                                        >  1:98798/1‑149 (MQ=255)                                                                cATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCgcag                                                                                   <  6:318763/149‑1 (MQ=255)                                                                        gCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGtt                                                                           >  1:372587/1‑149 (MQ=255)                                                                        gCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGtt                                                                           >  1:366692/1‑149 (MQ=255)                                                                            gTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGt                                                                            <  7:157598/144‑1 (MQ=255)                                                                            gTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGt                                                                            >  8:157598/1‑144 (MQ=255)                                                                            gTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTc                                                                         >  3:20907/1‑147 (MQ=255)                                                                               ggcggcGTGCATGTCCACCTCCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCg                                                                    <  8:305056/149‑1 (MQ=255)                                                                                 cggcgTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGc                                                                  >  1:226/1‑149 (MQ=255)                                                                                    cgTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTta                                                               >  6:46920/1‑149 (MQ=255)                                                                                              caccagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTcgc                                                     <  5:46920/149‑1 (MQ=255)                                                                                              caccagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTcgc                                                     >  2:230556/1‑149 (MQ=255)                                                                                               accagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGc                                                                     <  6:8267/132‑1 (MQ=255)                                                                                               accagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGc                                                                     <  7:265191/132‑1 (MQ=255)                                                                                               accagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGc                                                                     >  5:8267/1‑132 (MQ=255)                                                                                               accagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTcgc                                                     >  1:358080/1‑148 (MQ=255)                                                                                               accagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCAGTCGCAGGCGCAGCACCTGTTTCCAGc                                                                     >  8:265191/1‑132 (MQ=255)                                                                                                ccagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGACACCCTTGTGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGa                                                   <  2:98798/149‑1 (MQ=255)                                                                                                 cagcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGa                                                   >  6:138471/1‑148 (MQ=255)                                                                                                  agcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATa                                                 >  6:19363/1‑149 (MQ=255)                                                                                                  agcaccagGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATa                                                 <  6:316801/149‑1 (MQ=255)                                                                                                          gCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACAGCCt                                         >  8:172157/1‑149 (MQ=255)                                                                                                             aaCAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGTCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCtgtg                                      >  6:81995/1‑149 (MQ=255)                                                                                                             aaCAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCtgtg                                      >  4:287127/1‑149 (MQ=255)                                                                                                             aaCAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCtgtg                                      >  4:360784/1‑149 (MQ=255)                                                                                                                     tctcGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGcg                              >  5:49255/1‑149 (MQ=255)                                                                                                                     tctcGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGcg                              >  7:238831/1‑149 (MQ=255)                                                                                                                     tctcGGCCAGGATGTAGATACCATTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGcg                              >  3:21765/1‑149 (MQ=255)                                                                                                                          gCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGcggccgg                         <  5:138471/149‑1 (MQ=255)                                                                                                                                aTGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCgg                   >  6:345184/1‑149 (MQ=255)                                                                                                                                aTGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCgg                   <  3:29243/149‑1 (MQ=255)                                                                                                                                aTGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCgg                   <  1:230556/149‑1 (MQ=255)                                                                                                                                    aGATACCCTTGAGCTGCGCCAGGGCATAGCGCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTg                >  1:32432/1‑149 (MQ=255)                                                                                                                                      aTACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCTCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGa             <  1:37681/149‑1 (MQ=255)                                                                                                                                        aCCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGcggcc                           >  1:84897/1‑133 (MQ=255)                                                                                                                                        aCCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGcggcc                           <  2:84897/133‑1 (MQ=255)                                                                                                                                            ttGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGc                                                                  <  1:139546/90‑1 (MQ=255)                                                                                                                                            ttGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGc                                                                  >  2:139546/1‑90 (MQ=255)                                                                                                                                               aGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGAGGGACGTg     <  7:172157/148‑1 (MQ=255)                                                                                                                                               aGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGAGGGACGTg     <  5:19363/148‑1 (MQ=255)                                                                                                                                                 cTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGAGGGACGTgggg  <  2:32432/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTTGAGGCGCTCGTACATTATCCGCTCGTGGGCGGCGTGCATGTCCACCAGCACCAGGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGC‑CTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGAGGGACGTGGGG  >  NC_002947/5565998‑5566290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.