New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 560243668 (1.160)5 (0.090) 4/248 NT 6.9% coding (1046/5418 nt) PP_4924 subtilase family serine protease
?NC_002947 = 5602448 69 (1.220)coding (1034/5418 nt) PP_4924 subtilase family serine protease

ACGTTGCTCACCTGGCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGCCAGATGCTGATTGGGTCG  >  NC_002947/5602295‑5602581
                                                                                                                                             |                                                                                                                                                  
aCGTTGCTCACCTGGCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGa                                                                                                                                              <  8:233586/148‑1 (MQ=255)
aCGTTGCTCACCTGGCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAg                                                                                                                                             <  8:141571/149‑1 (MQ=255)
         aCCTGGCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAgcaa                                                                                                                                    >  3:119524‑M2/1‑145 (MQ=255)
         aCCTGGCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAgc                                                                                                                                      <  2:70495‑M2/147‑3 (MQ=255)
         aCCTGGCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAgc                                                                                                                                      <  7:343454‑M2/147‑3 (MQ=255)
              gCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCtcgacctcagcggcaaggg                                                                                                                                 <  6:131281‑M1/147‑20 (MQ=255)
              gCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCg                                                                                                                               >  6:289043/1‑149 (MQ=255)
                 ggTACCGTTGTCATGCACCAGCATGCCGGGCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGt                                                                                                                            <  8:339308/149‑1 (MQ=255)
                     ccGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGa                                                                                                                         <  8:343454/148‑1 (MQ=255)
                     ccGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGAc                                                                                                                        <  7:334837/149‑1 (MQ=255)
                           tCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACgt                                                                                                                  >  2:59937/1‑149 (MQ=255)
                             aTGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACgtgt                                                                                                                >  1:297652/1‑149 (MQ=255)
                                cACCAGCATGCCGGTCAGCCGGTCTGCCCAGTCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCa                                                                                                             >  5:189674/1‑149 (MQ=255)
                                cACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCa                                                                                                             >  7:250921/1‑149 (MQ=255)
                                 aCCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAAc                                                                                                                    >  6:318648/1‑141 (MQ=255)
                                 aCCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCCCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCAc                                                                                                            >  1:310522/1‑149 (MQ=255)
                                 aCCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGCTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAAc                                                                                                                    <  5:318648/141‑1 (MQ=255)
                                     gCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTg                                                                                                        <  5:205933/149‑1 (MQ=255)
                                         gCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCa                                                                                                    >  2:352973/1‑149 (MQ=255)
                                         gCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCa                                                                                                    >  4:369360/1‑149 (MQ=255)
                                           cGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCAtt                                                                                                  <  3:191353/149‑1 (MQ=255)
                                             gTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATtgc                                                                                                <  1:70495/149‑1 (MQ=255)
                                             gTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATAGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATtgc                                                                                                >  4:123238/1‑149 (MQ=255)
                                                aGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATATCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATtgctgc                                                                                             <  4:230070/149‑1 (MQ=255)
                                                 gCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGcc                                                                                            <  1:352973/149‑1 (MQ=255)
                                                          cccAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGtt                                                                                    <  8:250921/148‑1 (MQ=255)
                                                          cccAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGtt                                                                                    >  6:358130/1‑148 (MQ=255)
                                                          cccAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGtt                                                                                    >  6:4272/1‑148 (MQ=255)
                                                          cccAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGtt                                                                                    >  3:154059/1‑148 (MQ=255)
                                                            cAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAg                                                                                 >  5:352675/1‑149 (MQ=255)
                                                                   tGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACg                                                                          <  5:4272/149‑1 (MQ=255)
                                                                    gcggcgCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACgg                                                                         >  2:215894/1‑149 (MQ=255)
                                                                     cggcgCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGc                                                                        <  3:369360/149‑1 (MQ=255)
                                                                       gcgcAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCtcgacctcagcggcaagggcgttggtctgacgg                                                                                                                   <  4:91033‑M1/104‑34 (MQ=255)
                                                                       gcgcAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCtcgacctcagcggcaagggcgttggtctgacgg                                                                                                                   >  3:91033‑M1/1‑71 (MQ=255)
                                                                       gcgcAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCtcgacctcagcggcaagggcgtt                                                                                                                             <  1:20420‑M1/94‑24 (MQ=255)
                                                                       gcgcAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCtcgacctcagcggcaagggcgtt                                                                                                                             >  2:20420‑M1/1‑71 (MQ=255)
                                                                            gTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGAGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTgcg                                                                  >  6:57693/1‑148 (MQ=255)
                                                                             tGAACGACTGTTATCGATATCGCACAGTACGCCTTCCTCGATACCCGTCCGACCATCGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCCTGGGCATTGCTGCCAACCCGGCGAGAACCACGGCATTGCGCa                                                                <  6:39707/149‑1 (MQ=255)
                                                                               aaCCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAgg                                                              <  3:123238/149‑1 (MQ=255)
                                                                               aaCCACTGTTATCGATATCGAACAGTACGCCTTCCCCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAgg                                                              <  2:310522/149‑1 (MQ=255)
                                                                                aCCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATtgct                                                                                               <  8:284152/115‑1 (MQ=255)
                                                                                aCCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATtgct                                                                                               >  7:284152/1‑115 (MQ=255)
                                                                                  cACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTg                                                           <  6:189674/149‑1 (MQ=255)
                                                                                     tGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGtt                                                                                    >  1:224570/1‑121 (MQ=255)
                                                                                     tGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGtt                                                                                    >  1:219206/1‑121 (MQ=255)
                                                                                     tGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGtt                                                                                    <  2:224570/121‑1 (MQ=255)
                                                                                     tGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGtt                                                                                    <  2:219206/121‑1 (MQ=255)
                                                                                        tatcgatatcgaACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATcc                                                     >  3:185097/1‑149 (MQ=255)
                                                                                          tcgatatcgaACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCgg                                                   <  4:336336/149‑1 (MQ=255)
                                                                                          tcgatatcgaACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCgg                                                   <  4:154059/149‑1 (MQ=255)
                                                                                            gatatcgaACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGgtt                                                 >  1:10307/1‑149 (MQ=255)
                                                                                             atatcgaACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGgttg                                                >  3:340604/1‑149 (MQ=255)
                                                                                             atatcgaACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGgttg                                                >  6:214290/1‑149 (MQ=255)
                                                                                                 cgaACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCa                                            >  8:138549/1‑149 (MQ=255)
                                                                                                          cGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATtgctgc                                                                                             >  6:284119/1‑91 (MQ=255)
                                                                                                          cGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATtgctgc                                                                                             <  5:284119/91‑1 (MQ=255)
                                                                                                          cGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCa                                  <  2:10307/149‑1 (MQ=255)
                                                                                                             cTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCAt                                                                                                   <  7:110078/82‑1 (MQ=255)
                                                                                                             cTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCAt                                                                                                   >  8:110078/1‑82 (MQ=255)
                                                                                                             cTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGa                               >  5:355908/1‑149 (MQ=255)
                                                                                                                ccTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGAt                              <  5:57693/147‑1 (MQ=255)
                                                                                                                  tCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATa                             <  2:321980/146‑1 (MQ=255)
                                                                                                                  tCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATa                             >  1:321980/1‑146 (MQ=255)
                                                                                                                  tCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGaa                          >  2:113162/1‑149 (MQ=255)
                                                                                                                    gATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGaa                          <  6:352675/147‑1 (MQ=255)
                                                                                                                    gATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACt                        <  6:355908/149‑1 (MQ=255)
                                                                                                                         ccGTCAGACCAACGCCCTTGCCGCTGAGGTCGAgcaagggcgttggtctgacgggtatcgaggaaggcgtactgttcgatatcgataacagtggttcactgcgc                                                                 >  3:91033‑M2/1‑33 (MQ=255)
                                                                                                                         ccGTCAGACCAACGCCCTTGCCGCTGAGGTCGAgcaagggcgttggtctgacgggtatcgaggaaggcgtactgttcgatatcgataacagtggttcactgcgc                                                                 <  4:91033‑M2/104‑72 (MQ=255)
                                                                                                                         ccGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGcc                   <  5:289043/149‑1 (MQ=255)
                                                                                                                          cGTCAGACCAACGCCCTTGCCGCTGAGGTCTAGCAAGAGCGGGTCGACAAACGTGGTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGc                    >  5:360949/1‑147 (MQ=255)
                                                                                                                           gTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGc                    >  7:177995/1‑146 (MQ=255)
                                                                                                                           gTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGc                    >  7:207647/1‑146 (MQ=255)
                                                                                                                            tCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGCCAGa                <  5:358130/149‑1 (MQ=255)
                                                                                                                              aGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGCCAGAt               <  1:113162/148‑1 (MQ=255)
                                                                                                                                   aaCGCCCTTGCCGCTGAGGTCGAgcaagggcgttggtctgacgggtatcgaggaaggcgtactgttcgatatcgataacagtggttcactgcgc                                                                 >  2:20420‑M2/1‑23 (MQ=255)
                                                                                                                                   aaCGCCCTTGCCGCTGAGGTCGAgcaagggcgttggtctgacgggtatcgaggaaggcgtactgttcgatatcgataacagtggttcactgcgc                                                                 <  1:20420‑M2/94‑72 (MQ=255)
                                                                                                                                   aaCGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGc                                       <  4:114613/119‑1 (MQ=255)
                                                                                                                                      gCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGCCAGATGCTGATTgg      >  3:86229/1‑149 (MQ=255)
                                                                                                                                       cccTTGCCGCTGAGGTCGAgcaagggcgttggtctgacgggtatcgaggaaggcgtactgttcgatatcgataacagtggttcactgcgccgcaccggctgggcagaccggctgaccggcatgctggtgcatgacaacggtaccggc        <  6:131281‑M2/147‑129 (MQ=255)
                                                                                                                                       cccTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGCCAGATGCTGATTggg     <  4:185097/149‑1 (MQ=255)
                                                                                                                                          ttGCtcgacctcagcggcaagggcgttggtctgacgggtatcgaggaaggcgtactgttcgatatcgataacagtggttcactgcgccgcaccggctgggcagaccggctgaccggcatgctggtgcatgacaacggtaccggccaggt   >  3:119524‑M1/1‑4 (MQ=255)
                                                                                                                                          ttGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGCCAGATGCTGATTGGGTCg  >  7:283719/1‑149 (MQ=255)
                                                                                                                                            gCtcgacctcagcggcaagggcgttggtctgacgggtatcgaggaaggcgtactgttcgatatcgataacagtggttcactgcgccgcaccggctgggcagaccggctgaccggcatgctggtgcatgacaacggtaccggccaggt   <  2:70495‑M1/147‑146 (MQ=255)
                                                                                                                                            gCtcgacctcagcggcaagggcgttggtctgacgggtatcgaggaaggcgtactgttcgatatcgataacagtggttcactgcgccgcaccggctgggcagaccggctgaccggcatgctggtgcatgacaacggtaccggccaggt   <  7:343454‑M1/147‑146 (MQ=255)
                                                                                                                                            gCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCCATCACGATAGAACTGAGCCAGATGCTGATTGGGTCg  <  1:59937/148‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                  
ACGTTGCTCACCTGGCCGGTACCGTTGTCATGCACCAGCATGCCGGTCAGCCGGTCTGCCCAGCCGGTGCGGCGCAGTGAACCACTGTTATCGATATCGAACAGTACGCCTTCCTCGATACCCGTCAGACCAACGCCCTTGCCGCTGAGGTCGAGCAAGAGCGGGTCGACAAACGTGTTCACCGTGGTCATTGCTGCCAACCCGTTGAGTACCACGGCATTGCGCAGGCTGAAATCCGGTTGTTCATTGCCATCACGATAGAACTGAGCCAGATGCTGATTGGGTCG  >  NC_002947/5602295‑5602581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.