New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5868966 = | 57 (0.970) | 4 (0.070) | 3/250 | NT | 7.8% | coding (397/783 nt) | PP_5143 | membrane protein |
? | NC_002947 | 5869013 = | 39 (0.680) | coding (350/783 nt) | PP_5143 | membrane protein | |||||
Rejected: Coverage evenness skew score above cutoff. |
GCCGATGACGTGGCCACTGCCTGCTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGT > NC_002947/5868821‑5869113 | gCCGATGACGTGGCCACTGCCTGCTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGc > 3:340664/1‑148 (MQ=255) gATGACGTGGCCACTGCCTGCTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACg > 3:45494/1‑149 (MQ=255) aCGTGGCCACTGCCTGCTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTg < 4:45494/149‑1 (MQ=255) cACTGCCTGCTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGc > 7:33174/1‑144 (MQ=255) cACTGCCTGCTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGc < 8:33174/144‑1 (MQ=255) cctgcTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGttt > 5:346475/1‑148 (MQ=255) cctgcTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTg < 1:150056/149‑1 (MQ=255) gctgcATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTg > 5:140814/1‑146 (MQ=255) gctgcATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTg < 6:140814/146‑1 (MQ=255) ctgcATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAg < 5:150978/147‑1 (MQ=255) ctgcATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGCGGACGCCACGGCTGGCCTTGGGTTTGAg < 1:210469/147‑1 (MQ=255) tgcATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGt > 7:300482/1‑148 (MQ=255) gcATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTc > 1:81256/1‑148 (MQ=255) cATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTg > 6:112637/1‑130 (MQ=255) cATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTg < 5:112637/130‑1 (MQ=255) aTGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAg < 7:154610/149‑1 (MQ=255) tGGGCAGGGTACGCCAGGTTAGGAACGGCACCGTCAGCGAACCACCTCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCACAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAgg < 7:171482/149‑1 (MQ=255) tcAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCAACGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGcc < 5:277218/148‑1 (MQ=255) gCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAggg < 6:144582/147‑1 (MQ=255) gCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAggg > 5:144582/1‑147 (MQ=255) gTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTggg < 6:5450/119‑1 (MQ=255) gTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTggg > 5:5450/1‑119 (MQ=255) gTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAgg < 2:252425/132‑1 (MQ=255) gTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAgg > 1:252425/1‑132 (MQ=255) gTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGAt > 2:254943/1‑149 (MQ=255) gTGAGGAACGGCACCGTCAGCGAACCACAGCCAATGCCGAAAATGGCCGAGGCCCAGCAAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTAGGGAATGAGGTCAAGGGCCATCAGCgcggcg > 4:240207/1‑147 (MQ=255) aGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGAc < 7:249757/149‑1 (MQ=255) gAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGGTCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGAc > 8:33549/1‑147 (MQ=255) tcGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGGTTGCGGGGGACGCCACGGGTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAgg < 1:142919/148‑1 (MQ=255) aCGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAgg < 1:190967/149‑1 (MQ=255) aCCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGaa < 8:300482/149‑1 (MQ=255) aGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACAcc < 4:216028/149‑1 (MQ=255) accaccGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAgg > 4:311089/1‑133 (MQ=255) caccGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCGGGCCTTGGGGTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATc < 2:183251/149‑1 (MQ=255) ccGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCAATGATCtt < 4:340664/149‑1 (MQ=255) gCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCtttt < 6:346475/149‑1 (MQ=255) aTGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTgcag < 4:159403/149‑1 (MQ=255) cGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGt < 5:104537/149‑1 (MQ=255) gAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGTAGCAGTg > 4:135424/1‑149 (MQ=255) tGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGcccc < 5:289360/149‑1 (MQ=255) gCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCt < 3:216169/148‑1 (MQ=255) cGAGGCCCAGCCAATCAAGCCACCTGCACCGATCAGCCCAGGAATGCCGGGGACGACACGGCTCGCCTAGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACAAGGGCGAACACACCGATGATATTTTGCAGCAGTGGCGCGTGGa > 6:240605/1‑149 (MQ=255) gCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAg < 1:254943/149‑1 (MQ=255) ccAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGAc > 2:98701/1‑99 (MQ=255) ccAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGAc < 1:98701/99‑1 (MQ=255) cAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCg > 1:324538/1‑148 (MQ=255) aTCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGt > 5:350436/1‑149 (MQ=255) gCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGTGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCtt < 8:89723/147‑1 (MQ=255) gCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTga > 7:89723/1‑148 (MQ=255) cACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGTGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCa > 3:123822/1‑149 (MQ=255) ccGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACAcc < 6:350436/149‑1 (MQ=255) ccAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTg < 2:309949/129‑1 (MQ=255) ccAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTg > 1:309949/1‑129 (MQ=255) ggTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCaggag < 2:81256/149‑1 (MQ=255) gTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCaggag > 3:80481/1‑148 (MQ=255) gTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCagga > 7:250369/1‑147 (MQ=255) gTTGGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCATGGGCCTTCTGCGCGGCGATGACCTGGGCGAACACAGCGTTGATCTTTTGCAGCAGTGGCGCCTGGATCAGCGATGCGGTCTTGGCACCGACACGGGGGCCCagga < 8:250369/147‑1 (MQ=255) gCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGc > 3:78436/1‑149 (MQ=255) gACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATgg > 6:36790/1‑149 (MQ=255) aCGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGt < 4:78436/149‑1 (MQ=255) | GCCGATGACGTGGCCACTGCCTGCTGCATGGGCAGGCTACGCCAGGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGT > NC_002947/5868821‑5869113 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |