New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 593620158 (0.990)5 (0.090) 4/246 NT 8.2% coding (263/450 nt) PP_5205 hypothetical protein
?NC_002947 = 5936232 57 (1.020)coding (294/450 nt) PP_5205 hypothetical protein

CGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCG  >  NC_002947/5936053‑5936346
                                                                                                                                                       |                                                                                                                                                 
cGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCAC                                                                                                                                                   <  6:110886‑M1/149‑1 (MQ=255)
cGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCAC                                                                                                                                                   <  4:150394‑M1/149‑1 (MQ=255)
 gggCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCAC                                                                                                                                                   >  6:135758‑M1/1‑148 (MQ=255)
      aTGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCAGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCAcgaccga                                                                                                                                             >  2:19067/1‑149 (MQ=255)
       tGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCAcgaccgac                                                                                                                                            <  4:187969/149‑1 (MQ=255)
        gAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCAcgaccgac                                                                                                                                            >  2:119283/1‑148 (MQ=255)
            gTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGaa                                                                                                                                       >  6:150518/1‑149 (MQ=255)
               ggTTACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGATTCACCCGCGCGTCCTACCCCGACCCCACCGCGCTGGACCCTGAAAGCAATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAAcc                                                                                                                                     <  5:278049/148‑1 (MQ=255)
                 tGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGt                                                                                                                                  >  5:74244/1‑149 (MQ=255)
                             cttctACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGt                                                                                                                        <  1:223213/147‑1 (MQ=255)
                                ctACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGa                                                                                                                     <  5:150518/147‑1 (MQ=255)
                                   ccACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTg                                                                                                                                 <  1:266676/132‑1 (MQ=255)
                                   ccACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTg                                                                                                                                 >  2:266676/1‑132 (MQ=255)
                                   ccACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtgg                                                                                                                >  4:186005‑M2/1‑145 (MQ=255)
                                    cACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggc                                                                                                               >  5:135758‑M2/1‑144 (MQ=255)
                                     aCTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggcc                                                                                                              <  2:93582‑M2/149‑7 (MQ=255)
                                      cTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACatccaccgcgctccacgggttcttgtcggtcgtggcct                                                                                                             >  7:167337‑M1/1‑111 (MQ=255)
                                         cagcgccccgcaaccCGGCATAGCCGGCATTGCCAGAAGCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACatccaccgcgctccacgggttcttgtcggtcgtggcctt                                                                                                            <  7:294357‑M1/141‑40 (MQ=255)
                                         cAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACatccaccgcgctccacgggttcttgtcggtcgtggcctt                                                                                                            <  8:167337‑M1/147‑40 (MQ=255)
                                         cAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCAc                                                                                                           <  6:180485/148‑1 (MQ=255)
                                               cccGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACaa                                                                                                     <  4:57014/148‑1 (MQ=255)
                                               cccGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACaa                                                                                                     <  6:141162/148‑1 (MQ=255)
                                                 cGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGAt                                                                                                                    >  1:324306/1‑131 (MQ=255)
                                                 cGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGAt                                                                                                                    <  2:324306/131‑1 (MQ=255)
                                                    aaCCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCttt                                                                                               <  3:75213/149‑1 (MQ=255)
                                                    aaCCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCttt                                                                                               <  1:93582/149‑1 (MQ=255)
                                                         ggCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAg                                                                                          >  5:257026/1‑149 (MQ=255)
                                                               gCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGCCAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCt                                                                                    >  6:97625/1‑149 (MQ=255)
                                                                ccGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGc                                                                                     <  1:205282/147‑1 (MQ=255)
                                                                ccGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGc                                                                                     >  2:205282/1‑147 (MQ=255)
                                                                   gCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGaa                                                                                <  6:257026/149‑1 (MQ=255)
                                                                   gCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGGGCTGGaa                                                                                >  8:144738/1‑149 (MQ=255)
                                                                         ccAGAATCACCCGCGCGGCCTACCCCGATCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTgggg                                                                          >  7:144348/1‑149 (MQ=255)
                                                                         ccAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACaa                                                                                                                                          <  8:279006/85‑1 (MQ=255)
                                                                         ccAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACaa                                                                                                                                          >  7:279006/1‑85 (MQ=255)
                                                                         ccAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTg                                                                                   >  1:35843/1‑140 (MQ=255)
                                                                         ccAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTg                                                                                   <  2:35843/140‑1 (MQ=255)
                                                                         caacaaTCACCAGCGCCGCCTACCCCGAACCGACCGCGCTGGACCCAGAAACCCATTATAAAGATG‑‑CCAAGGCCACGCACGACAACAACCCGTGGAACCAGGTGGATGTTGCCCACGTACAAAACTTACCAAGGGTGCTGGAACTggtg                                                                          >  4:192335/5‑147 (MQ=255)
                                                                          cAGAATCACCCGCTCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAACCCATTATCACGATG‑‑CCACGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGggc                                                                         <  3:192335/149‑1 (MQ=255)
                                                                          cAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGggc                                                                         <  1:19067/149‑1 (MQ=255)
                                                                          cAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGggc                                                                         >  3:191431/1‑149 (MQ=255)
                                                                           aGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGggcg                                                                        >  6:140336/1‑149 (MQ=255)
                                                                               tCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCCTAGATGAATTTTTTTAACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGggcgg                                                                       <  1:119283/149‑1 (MQ=255)
                                                                                 aCCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACatccaccgcgctccacgggttcttgtcggtcgtggcc                                                                                                              <  5:336469‑M1/105‑38 (MQ=255)
                                                                                 aCCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACatccaccgcgctccacgggttcttgtcggtcgtggcc                                                                                                              >  6:336469‑M1/1‑68 (MQ=255)
                                                                                  cccGCGCGGCCTACCCCGACCCGACCGCGCTGTACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGaaa                                                                 <  1:243374/149‑1 (MQ=255)
                                                                                    cgcgcgGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGaaa                                                                 >  6:5737/1‑147 (MQ=255)
                                                                                      cgcgGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAAcagc                                                             <  6:74244/149‑1 (MQ=255)
                                                                                          gCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGc                                                         <  5:5737/149‑1 (MQ=255)
                                                                                          gCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGc                                                         <  1:307588/149‑1 (MQ=255)
                                                                                           ccTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGcc                                                        >  2:84958/1‑149 (MQ=255)
                                                                                                cccgacccgaCCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGaa                                                                                >  8:208883/1‑120 (MQ=255)
                                                                                                cccgacccgaCCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGaa                                                                                <  7:208883/120‑1 (MQ=255)
                                                                                                                tGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTg                                   >  3:350935/1‑149 (MQ=255)
                                                                                                                  gACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTg                                   <  5:60301/147‑1 (MQ=255)
                                                                                                                       tGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGt                                                                                                                        >  8:188940/1‑57 (MQ=255)
                                                                                                                       tGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGt                                                                                                                        <  7:188940/57‑1 (MQ=255)
                                                                                                                          aaGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAg                         >  1:264145/1‑149 (MQ=255)
                                                                                                                               aTTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAgc                    >  4:367208/1‑149 (MQ=255)
                                                                                                                               aTTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAgc                    >  8:4205/1‑149 (MQ=255)
                                                                                                                                   tCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGaa                                                                                >  4:49693/1‑85 (MQ=255)
                                                                                                                                   tCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGaa                                                                                <  3:49693/85‑1 (MQ=255)
                                                                                                                                   tCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAgccgcc                >  7:234130/1‑149 (MQ=255)
                                                                                                                                   tCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAgccgcc                >  3:199197/1‑149 (MQ=255)
                                                                                                                                      aCGATG‑‑CCAAGGCCACGACCGACAAGAACCGGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGc                                     <  4:21016/126‑1 (MQ=255)
                                                                                                                                      aCGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGc                                     >  3:21016/1‑126 (MQ=255)
                                                                                                                                           g‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGt         >  7:223674/1‑149 (MQ=255)
                                                                                                                                           g‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGt         >  7:223676/1‑149 (MQ=255)
                                                                                                                                                aaGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgcttctggcaatgccggctatgccgggttgcggggcgctg        <  7:294357‑M2/147‑109 (MQ=255)
                                                                                                                                                aaGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccggctatgccgggttgcgggcagctg        <  8:167337‑M2/147‑109 (MQ=255)
                                                                                                                                                aaGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCAt      >  7:95820/1‑149 (MQ=255)
                                                                                                                                                 aGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccggctatgccgggttgcgggcagctggag     >  7:167337‑M2/1‑38 (MQ=255)
                                                                                                                                                  ggCCACatccaccgcgctccacgggttcttgtcggtcgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccggctatgccgggttgcgggcagctggagt    <  2:93582‑M1/149‑144 (MQ=255)
                                                                                                                                                  ggCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggt                                                >  6:336469‑M2/1‑37 (MQ=255)
                                                                                                                                                  ggCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggt                                                <  5:336469‑M2/105‑69 (MQ=255)
                                                                                                                                                   gCCACatccaccgcgctccacgggttcttgtcggtcgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccggctatgccgggttgcgggcagctggagtg   >  5:135758‑M1/1‑5 (MQ=255)
                                                                                                                                                    ccACatccaccgcgctccacgggttcttgtcggtcgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccggctatgccgggttgcgggcagctggagtgg  >  4:186005‑M1/1‑4 (MQ=255)
                                                                                                                                                    ccACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCg  <  2:264145/149‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                 
CGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATG‑‑CCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCG  >  NC_002947/5936053‑5936346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.