New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 794567 =59 (1.000)5 (0.090) 3/250 NT 7.6% coding (709/2439 nt) PP_0680 ATP‑dependent protease‑like protein
?NC_002947 794630 = 64 (1.120)coding (772/2439 nt) PP_0680 ATP‑dependent protease‑like protein

ATTCCACGAGGACATTGCCCTGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAGCTGCTCGAAGAGCAGTACGCGCC  >  NC_002947/794482‑794775
                                                                                                                                                    |                                                                                                                                                     
gttgctcgaccagcgtacgcaacaggttcaactgcaccgattgcaggtaggcgcacaccgccgcgttttcggcgtacttttccgaCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGt                                                                                                                                                       >  2:58826‑M1/86‑149 (MQ=255)
 ttCCACGAGGACATTGCCCTTCTTGAGGAGCTCATCAACGAAGAGCTTGCCATCCTTCCGCAATTGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAATAAACCATCACCCTGGCACTGCAGCCGTTTCTGGCGCCGCTGTc                                                                                                                                                      <  8:337080/149‑1 (MQ=255)
        aGGACATTGCCCTGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAg                                                                                                                                               <  5:151341/149‑1 (MQ=255)
         ggACATTGCCCTGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAg                                                                                                                                               >  3:297364/1‑148 (MQ=255)
                  gcaacaggttcaactgcaccgattgcaggtaggcgcacaccgccgcgttttcggcgtacttttccgaCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCg                                                                                                                                                     >  1:194219‑M1/68‑133 (MQ=255)
                  gcaacaggttcaactgcaccgattgcaggtaggcgcacaccgccgcgttttcggcgtacttttccgaCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCg                                                                                                                                                     >  1:200081‑M1/68‑133 (MQ=255)
                  gcaacaggttcaactgcaccgattgcaggtaggcgcacaccgccgcgttttcggcgtacttttccgaCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCg                                                                                                                                                     <  2:200081‑M1/66‑1 (MQ=255)
                  gcaacaggttcaactgcaccgattgcaggtaggcgcacaccgccgcgttttcggcgtacttttccgaCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCg                                                                                                                                                     <  2:194219‑M1/66‑1 (MQ=255)
                  ccTGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGaa                                                                                                                                   >  3:111952/1‑148 (MQ=255)
                  ccTGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGaa                                                                                                                                   >  6:4880/1‑148 (MQ=255)
                  ccTGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGaa                                                                                                                                   >  5:311553/1‑148 (MQ=255)
                   cTGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGaaaa                                                                                                                                 >  2:300494/1‑149 (MQ=255)
                    tGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCGTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAAc                                                                                                                                >  7:203461/1‑149 (MQ=255)
                     gCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAAcg                                                                                                                               >  7:325659/1‑149 (MQ=255)
                      gttGAGGCGCTCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAAcgc                                                                                                                              >  1:179612/2‑149 (MQ=255)
                         gaggagCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAAcgcg                                                                                                                             <  3:282454/147‑1 (MQ=255)
                         gaggagCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACgcgg                                                                                                                            <  1:48503/148‑1 (MQ=255)
                          aggagCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACgcggc                                                                                                                           <  5:4880/148‑1 (MQ=255)
                            gagCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGCACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGgt                                                                                                                        >  4:278101/1‑149 (MQ=255)
                            gagCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGgt                                                                                                                        >  3:202334/1‑149 (MQ=255)
                              gcgcCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGgtg                                                                                                                       <  8:325659/148‑1 (MQ=255)
                                gcCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTgc                                                                                                                    <  3:323960/149‑1 (MQ=255)
                                  cTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACAAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTgcgc                                                                                                                  >  1:11386/1‑149 (MQ=255)
                                   tCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCCTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGcc                                                                                                                 >  2:55055/1‑149 (MQ=255)
                                           gagCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGc                                                                                                          >  5:21883/1‑148 (MQ=255)
                                            agCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCaa                                                                                                        >  5:298969/1‑149 (MQ=255)
                                              cTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATc                                                                                                      <  8:345851/149‑1 (MQ=255)
                                                 gCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCgg                                                                                                    <  4:202334/148‑1 (MQ=255)
                                                 gCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGt                                                                                                   >  1:294987/1‑149 (MQ=255)
                                                 gCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGt                                                                                                   >  2:104621/1‑149 (MQ=255)
                                                   cAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTg                                                                                                  >  2:263292/1‑148 (MQ=255)
                                                     gCCTGCAGCAATGGAAGCGCTAATCTATCAACCAGCTGCGCAAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCTGTGTGCGCCTACCTGCAATCGGTGCAg                                                                                              <  4:111952/149‑1 (MQ=255)
                                                       cTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGtt                                                                                            >  4:69522/1‑149 (MQ=255)
                                                          ccGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGaa                                                                                         <  6:21883/149‑1 (MQ=255)
                                                           cGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAAc                                                                                        >  3:275867/1‑149 (MQ=255)
                                                            gCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAAcc                                                                                       >  7:17443/1‑149 (MQ=255)
                                                                tGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGtt                                                                                   <  6:298969/149‑1 (MQ=255)
                                                                tGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACAAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGtt                                                                                   <  2:11386/149‑1 (MQ=255)
                                                                   aaGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGc                                                                                 <  3:69522/148‑1 (MQ=255)
                                                                       gcgAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACg                                                                            >  2:5383/1‑149 (MQ=255)
                                                                        cgAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGc                                                                           <  8:203461/149‑1 (MQ=255)
                                                                               aacaacCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGa                                                                    <  4:324946/149‑1 (MQ=255)
                                                                               aacaacCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGa                                                                    <  1:104621/149‑1 (MQ=255)
                                                                                acaacCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAg                                                                   <  8:71463/149‑1 (MQ=255)
                                                                                  cgacagcggcgccagcaacggctgcagtgccagggtgatggtttcttcgttgagctggcgcagctgTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGc                                                                                 <  2:194219‑M2/67‑1 (MQ=255)
                                                                                  cgacagcggcgccagcaacggctgcagtgccagggtgatggtttcttcgttgagctggcgcagctgTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGc                                                                                 >  1:200081‑M2/67‑133 (MQ=255)
                                                                                  cgacagcggcgccagcaacggctgcagtgccagggtgatggtttcttcgttgagctggcgcagctgTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGc                                                                                 >  1:194219‑M2/67‑133 (MQ=255)
                                                                                  cgacagcggcgccagcaacggctgcagtgccagggtgatggtttcttcgttgagctggcgcagctgTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGc                                                                                 <  2:200081‑M2/67‑1 (MQ=255)
                                                                                  aacCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGc                                                                  >  3:367769/1‑148 (MQ=255)
                                                                                   acCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCaa                                                                <  2:294987/149‑1 (MQ=255)
                                                                                    acagcggcgccagcaacggctgcagtgccagggtgatggtttcttcgttgagctggcgcagctgTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAAc                                                               >  2:58826‑M2/65‑149 (MQ=255)
                                                                                        CTGCGCCTGCTCAACGATTAAACCATCACCCTGGCACTGCTGCGGTTGTTGGCGCGGCTGTCGGAAAAGTACCTACACGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCaa                                                                >  1:300494‑M1/1‑147 (MQ=255)
                                                                                           cgcCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGa                                                        <  2:179612/149‑1 (MQ=255)
                                                                                            gcCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACACTGGTCGAGCAACTGGTCgtt                                                       <  4:297364/149‑3 (MQ=255)
                                                                                              cAGCTCAACGAAGAACCCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGGGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGa                                                     <  6:311553/149‑1 (MQ=255)
                                                                                                gCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACa                                                   <  8:17443/149‑1 (MQ=255)
                                                                                                 cTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACa                                                   <  1:263292/149‑1 (MQ=255)
                                                                                                  tCAACGAAGAAACCATCACCCTGGCACTGCACCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACAAGCAAAAGGTGCATTTGAAACTGTTGCCTAAGCTTCTCGAGCAACtc                                                             >  6:32197/1‑136 (MQ=255)
                                                                                                      cGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGt                                             >  5:18180/1‑149 (MQ=255)
                                                                                                       gcagaaACCATCACCCTGGCACTGCTGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTg                                                                                  <  8:220678/109‑1 (MQ=255)
                                                                                                        aagaaACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTcc                                           >  2:347436/1‑149 (MQ=255)
                                                                                                         agaaACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAg                                                  <  8:264711/141‑1 (MQ=255)
                                                                                                         agaaACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAg                                                  >  7:264711/1‑141 (MQ=255)
                                                                                                          gaaACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAg                                                                                              >  8:28636/1‑96 (MQ=255)
                                                                                                          gaaACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAg                                                                                              <  7:28636/96‑1 (MQ=255)
                                                                                                              ccATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGcc                                     <  1:55055/149‑1 (MQ=255)
                                                                                                               cATCACCCTGGCACTGCAGCCGTTGCTGGCGCGGCAGTCGGAAAAGTACG‑‑CCGAAAACGCGGCCGTGTGCGCCAACCAGCCATCGGTGCAGTTGAACCTGTTGCGAACGCTGGTCTAGCAACTGGTCGATGACAGCAAGTCCGACTcc                                     >  3:271046/1‑148 (MQ=255)
                                                                                                                aTCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGt                                   >  8:250391/1‑149 (MQ=255)
                                                                                                                 tCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTg                                  <  4:275867/149‑1 (MQ=255)
                                                                                                                    cccTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCaa                                                                >  6:222847/1‑116 (MQ=255)
                                                                                                                    cccTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCaa                                                                <  5:222847/116‑1 (MQ=255)
                                                                                                                          cACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAg                         <  6:18180/149‑1 (MQ=255)
                                                                                                                              gCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAgctgc                     >  5:70168/1‑149 (MQ=255)
                                                                                                                               cAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAgctgct                    >  8:7492/1‑149 (MQ=255)
                                                                                                                                aGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAGCTGCTc                   <  1:347436/149‑1 (MQ=255)
                                                                                                                                        cTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAGCTGCTCGAAGAGCa           <  1:17392/149‑1 (MQ=255)
                                                                                                                                             gccgcTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGCCGCCGTGGCCCGCAAGCTGCTCGAAGAGCAGTAcg      >  8:233717/1‑149 (MQ=255)
                                                                                                                                              ccgcTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAGCTGCTCTTCGAGCAgcttgc     <  6:70168/149‑6 (MQ=255)
                                                                                                                                                 ctgTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAGCTGCTCGAAGAGCAGTACGCGcc  <  7:250391‑M2/146‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
ATTCCACGAGGACATTGCCCTGCTTGAGGAGCGCCTCAACGAAGAGCTGGCCAGCCTGCCGCAATGGAAGCGCGAATCGAACAACCAGCTGCGCCAGCTCAACGAAGAAACCATCACCCTGGCACTGCAGCCGTTGCTGGCGCCGCTGTCGGAAAAGTACG‑‑CCGAAAACGCGGCGGTGTGCGCCTACCTGCAATCGGTGCAGTTGAACCTGTTGCGTACGCTGGTCGAGCAACTGGTCGATGACAGCAAGTCCGACGCCGTGGCCCGCAAGCTGCTCGAAGAGCAGTACGCGCC  >  NC_002947/794482‑794775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.