New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 907821 | 51 (0.870) | 4 (0.070) | 4/244 | NT | 8.0% | coding (390/777 nt) | yjjV | putative hydrolase |
? | NC_002947 | = 907870 | 44 (0.790) | coding (341/777 nt) | yjjV | putative hydrolase |
GCCGGCAAACGCATGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGTCGAGGTAGAC > NC_002947/907728‑908015 | gCCGGCAAACGCATGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGTGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGcct < 6:8606‑M2/146‑4 (MQ=255) gCCGGCAAACGCATGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGTGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGcct > 5:8606‑M2/1‑143 (MQ=255) cGGCAAACGCATGAATCACCCCCGCCCGTGCGGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTTCAGTTGCGCTTCGAACAGCGCCTGCTgg < 6:217405/149‑1 (MQ=255) gCAAACGCATGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCg > 5:212929/1‑149 (MQ=255) gCAAACGCATGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCg > 6:366079/1‑149 (MQ=255) cAAACGCATGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCgg < 7:198566/149‑1 (MQ=255) aaaCGCATGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCggg > 3:48417/1‑149 (MQ=255) aTGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCgg > 1:82622/1‑142 (MQ=255) aTGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCgg < 2:82622/142‑1 (MQ=255) aaTCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCaa < 6:212929/149‑1 (MQ=255) aTCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAg < 4:48417/149‑1 (MQ=255) tCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAgg > 4:192498/1‑149 (MQ=255) cccccGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCt > 6:49858/1‑149 (MQ=255) cccgcccgTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGc > 4:37698/1‑149 (MQ=255) ccgcccgTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCg < 2:118260/149‑1 (MQ=255) cccgTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCATGGTCTGCGAgg < 5:49858/149‑1 (MQ=255) gTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTaa > 1:156251/1‑149 (MQ=255) gTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTaa < 3:18165/149‑1 (MQ=255) gTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTaa < 2:156251/149‑1 (MQ=255) gCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTaa > 1:129130/1‑147 (MQ=255) gCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTc < 8:210088/148‑1 (MQ=255) ttGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAg > 4:232904/1‑128 (MQ=255) ttGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAg > 5:220245/1‑149 (MQ=255) aGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGcc > 3:367943/1‑148 (MQ=255) gAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTc < 4:249552/147‑1 (MQ=255) tgGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCt < 5:269855/105‑1 (MQ=255) tgGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCt > 6:269855/1‑105 (MQ=255) tgGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACg > 2:72436/1‑149 (MQ=255) tCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACAt < 3:192498/149‑1 (MQ=255) gCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCTCCTACGTCACATAGCCGCgg < 4:367943/149‑1 (MQ=255) gCATGGCTGCGGCGCACGTGCAGCAGGGCCGCTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCgg > 1:39232/1‑149 (MQ=255) cATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCggg < 3:37698/149‑1 (MQ=255) gCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAAGTCACCTACGGCACATAGCCGCGGGTTGt < 1:210931/149‑1 (MQ=255) cTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTc < 2:129130/149‑1 (MQ=255) gcgcACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTcgcg > 2:240228/1‑147 (MQ=255) tGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGcctgctgcacgtgcgccgcagccatgcccaggtgattgccacactcaagcgctacaagccagcacgggcgggggtgattcatgcgtttgcc < 8:60499‑M2/149‑92 (MQ=255) cagGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGcctgctgcacgtgcgccgcagccatgcccaggtgattgccacactcaagcgctacaagccagcacgggcgggggtgattcatgcgt > 3:368487‑M2/1‑53 (MQ=255) cagGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGcctgctgcacgtgcgccgcagccatgcccaggtgattgccacactcaagcgctacaagccagcacgggcgggggtgattcatgcgt < 4:368487‑M2/139‑87 (MQ=255) ggTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGcctgctgcacgtgcgccgcagccatgcccaggtgattgccacactcaagcgctacaagccagcacgggcgggggtgattcatgcgtttgccggcagctacgaa > 7:60499‑M2/1‑46 (MQ=255) ttCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCgg > 5:276761/1‑114 (MQ=255) ttCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCgg < 6:276761/114‑1 (MQ=255) ttCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGtt > 6:308270/1‑149 (MQ=255) cGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAgg < 2:79436/149‑1 (MQ=255) gCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCCGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGt > 4:305763/1‑149 (MQ=255) cAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTcgcg < 3:40710/134‑1 (MQ=255) cAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTcgcg > 4:40710/1‑134 (MQ=255) cAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTg < 5:308270/149‑1 (MQ=255) cctatattGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTGAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCATGCGCTCCATCCACTCTCGCAGTTGCACCAGGTg < 5:173072/140‑1 (MQ=255) tCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAggg > 4:80142/1‑149 (MQ=255) aGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATg < 1:240228/149‑1 (MQ=255) ttGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCt > 1:307333/1‑149 (MQ=255) cgcTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCTCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGt < 2:39232/149‑1 (MQ=255) cgcTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTgg < 6:220245/148‑1 (MQ=255) ttCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGTc > 1:259286/1‑147 (MQ=255) ttCGAACAGCGCCCGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGTc > 7:214389/1‑147 (MQ=255) aaCAGCGCCCGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGTCGAGGTa < 8:214389/149‑1 (MQ=255) aCAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGTCGAGGTAg < 3:80142/149‑1 (MQ=255) cAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTTTTAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGTCGAg < 5:140596/144‑1 (MQ=255) cAGCGCCTGCTGGCCCGTCTAGACAACGTCTCCGAGGTAATAGTCCAGGCCGAACTCACCTACCCCACATAGCCGCCCGTTGTCCCGCAGGCGCTCCAGCCACACGCGCAGTTGCACCAGCTGCTAAGGGCGATGCTGGTCGatgata > 6:140596/1‑143 (MQ=255) aGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGTCGAGGTAGAc > 6:342575/1‑149 (MQ=255) | GCCGGCAAACGCATGAATCACCCCCGCCCGTGCTGGCTTGTAGCGCTTGAGTGTGGCAATCACCTGGGCATGGCTGCGGCGCACGTGCAGCAGGGCCGGTAGTTCGAAGTCGCAAGCCATCTGCAGTTGCGCTTCGAACAGCGCCTGCTGGCGGGTCTTGTCAAGGTCTGCGAGGTAATAGTCCAGGCCGAACTCACCTACGGCACATAGCCGCGGGTTGTCGCGCAGGCGCTCCAGCCACTCGCGCAGTTGCACCAGGTGCTCAGGGCGATGCTGGTCGAGGTAGAC > NC_002947/907728‑908015 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |