New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1051409	50 (0.850)	5 (0.090)	4/246	NT	9.6%	coding (511/1065 nt)	PP_0909	hypothetical protein
	?	NC_002947	= 1051421	46 (0.820)					coding (499/1065 nt)	PP_0909	hypothetical protein

GGCGCGCAACAGATCGGCGATAGCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCAACGCCTCAGCATCAACCGGCTTGTCGCCGTT  >  NC_002947/1051278‑1051568                                                                                                                                                |                                                                                                                                                    ggCGCGCAACAGATCGGCGATAGCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCcac                                                                                                                                                  >  2:31101‑M2/1‑144 (MQ=255)  gcgcgcAACAGATCGGCGATAGCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCcaccag                                                                                                                                               >  5:96734‑M2/1‑143 (MQ=255)      gcAACAGATCGGCGATAGCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCagcagc                                                                                                                                           >  3:314017/1‑149 (MQ=255)       cAACAGATCGGCGATAGCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCg                                                                                                                                          <  1:113294/149‑1 (MQ=255)                ggCGATAGCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGc                                                                                                                                 >  3:102219/1‑149 (MQ=255)                 gCGATAGCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCg                                                                                                                                <  2:260466/149‑1 (MQ=255)                       gCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCttt                                                                                                                          <  3:334547/149‑1 (MQ=255)                         cTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCt                                                                                                                        >  5:261499/1‑149 (MQ=255)                         cTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCt                                                                                                                        >  2:24955/1‑149 (MQ=255)                         cTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCt                                                                                                                        <  1:89627/149‑1 (MQ=255)                             tGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTc                                                                                                                    <  7:274140/149‑1 (MQ=255)                                  gTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAg                                                                                                               <  6:261499/149‑1 (MQ=255)                                    cGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTg                                                                                                             >  8:202344/1‑149 (MQ=255)                                     ggCATAGCGCGGGTTGGGGAACTTGGACATCTGCGACAGCATGCCGTCGGTGCGGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCATCTGGGGCGCGCGGAGGGGCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTgg                                                                                                            >  6:97678/1‑149 (MQ=255)                                      gCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGc                                                                                                           >  4:37899/1‑149 (MQ=255)                                      gCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGc                                                                                                           >  4:198057/1‑149 (MQ=255)                                                 gTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCt                                                                                                <  2:79714/149‑1 (MQ=255)                                                 gTTGGGGAAATTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCAAAGGCCTTCTGGTGCGCGACGATGGCCACAAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGTCAGTGGCGATGTCAGGCt                                                                                                >  1:289141/1‑149 (MQ=255)                                                    ggggAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTg                                                                                              <  7:202344/148‑1 (MQ=255)                                                        aaCTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTc                                                                                         <  1:24955/149‑1 (MQ=255)                                                               tCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAg                                                                                   >  6:184986/1‑148 (MQ=255)                                                                 aTCTACGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCATCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCAGTTCGGCAGAGGCGATGTCCGGCTTGCTGTCGAACAGGAt                                                                                >  7:279044/1‑149 (MQ=255)                                                                    tGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTa                                                                             >  1:36284/1‑149 (MQ=255)                                                                        aaaGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCa                                                                         <  4:102219/149‑1 (MQ=255)                                                                          aGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATa                                                                       <  3:37899/149‑1 (MQ=255)                                                                                ccGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGa                                                                 >  6:280464/1‑149 (MQ=255)                                                                                   tCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACaa                                                              <  4:314017/149‑1 (MQ=255)                                                                                              ccAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCa                                                   >  5:210839/1‑149 (MQ=255)                                                                                               cAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCAc                                                  >  7:238121/1‑149 (MQ=255)                                                                                                aGCCTTTGAGAATCTCCTCTGACAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTATCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGCCGAACAGGATGTACTCATAGTCCGACAAGCCACGTACAAc                                                  >  1:364961/1‑148 (MQ=255)                                                                                                 gcatttGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCAACCAGCAGCGGTCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGTCTTGCTGCCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTa                                                <  2:364961/146‑1 (MQ=255)                                                                                                    tttGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCAc                                                  >  1:251302/1‑144 (MQ=255)                                                                                                    tttGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCAc                                                  <  2:251302/144‑1 (MQ=255)                                                                                                    tttGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGc                                             >  2:40161/1‑149 (MQ=255)                                                                                                    tttGAGAATCTCCTCTGCCAAGGCCTTCTGGAGCGCGCCGAAGGCCACCAGCAGCGGGCAGTAGCGGGCATTCTGTACGGCAGTGGCGATGTCCGGCTTGCTCTCGAACAGGATGTACTCATAGGCCGACAAGcc                                                           >  8:340968/1‑135 (MQ=255)                                                                                                      tGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTg                                           >  3:337342/1‑149 (MQ=255)                                                                                                       gagaATTTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCAGCTGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTGCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTg                                           <  8:279044/148‑1 (MQ=255)                                                                                                       gagaATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTg                                           >  5:9810/1‑148 (MQ=255)                                                                                                           aTCTCCTCTGCAAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCATCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCTATGTCCGGCTTGCTGTCGAACAGGATTTACTCATAGGCAGACAAGCCACGTACCACTACGCTGTACtt                                      <  2:289141/149‑1 (MQ=255)                                                                                                                ctctGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGc                                    <  5:280464/146‑1 (MQ=255)                                                                                                                 tctGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCaa                                >  8:310508/1‑149 (MQ=255)                                                                                                                 tctGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCaa                                >  3:208493/1‑149 (MQ=255)                                                                                                                   tGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGAGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCAACg                              >  6:330068/1‑149 (MQ=255)                                                                                                                     ccAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCAACGc                             <  4:132082/148‑1 (MQ=255)                                                                                                                      cAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCAACGcc                            >  8:263731/1‑148 (MQ=255)                                                                                                                       aaGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTg                                           >  2:361806/1‑132 (MQ=255)                                                                                                                       aaGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTg                                           <  1:361806/132‑1 (MQ=255)                                                                                                                           ccTTCTGGGGCTCGCCGTGGGCCACCAGCAGCGGGCAGTAGCGGGCATTCAGTTCGGCAGTGGCGATGTCCGGCATGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCTCGTACGACTACGCTGGACTTGCCCAACGCCTCAGCa                      <  5:97678/149‑1 (MQ=255)                                                                                                                            cTTCTGGTGCGCGCCGATGGCcaccagcaggccttggcagaggagattctcaaaggctggaacagcaccgacggcatgctttcgcagatgaccaagttccccaaccagcgctatgccgactcccatgaggctatcgccgatctgttgcg                     <  5:107035‑M2/149‑129 (MQ=255)                                                                                                                            cTTCTGGTGCGCGCCGATGGCcaccagaaggccttggcagaggagattctcaaaggctggaacagcaccgacggcatgctttcgca                                                                                    <  7:180682‑M2/86‑66 (MQ=255)                                                                                                                            cTTCTGGTGCGCGCCGATGGCcaccagaaggccttggcagaggagattctcaaaggctggaacagcaccgacggcatgctttcgca                                                                                    >  8:180682‑M2/1‑21 (MQ=255)                                                                                                                                tGGTGCGCGCCGATGGCcaccagaaggccttggcagaggagattctcaaaggctggaacagcaccgacggcatgctttcgcaga                                                                                  >  7:11701‑M2/1‑17 (MQ=255)                                                                                                                                tGGTGCGCGCCGATGGCcaccagaaggccttggcagaggagattctcaaaggctggaacagcaccgacggcatgctttcgcaga                                                                                  <  8:11701‑M2/84‑68 (MQ=255)                                                                                                                                     cgcgcCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGa                                         >  4:182256/1‑120 (MQ=255)                                                                                                                                           gATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGTCGTTGTCCGTCTTGGTGTGGATCAGGATGTACTCTTAGGCCGTCAAGCCACGAACCACTACGCTGGACTTTCCCAACGCCTCAGCATCAACCGGGTTGTCGc      <  5:300668/149‑1 (MQ=255)                                                                                                                                               gCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCAACGCCTCAGCATCAACCGGCTTGTCGCCGt   <  6:210839/148‑1 (MQ=255)                                                                                                                                                ccaccaGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGTAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCAACGCCTCAGCATCAACCGGCTTGTCGCCGtt  >  2:365859/1‑148 (MQ=255)                                                                                                                                                |                                                                                                                                                    GGCGCGCAACAGATCGGCGATAGCCTCATGGGAGTCGGCATAGCGCTGGTTGGGGAACTTGGTCATCTGCGAAAGCATGCCGTCGGTGCTGTTCCAGCCTTTGAGAATCTCCTCTGCCAAGGCCTTCTGGTGCGCGCCGATGGCCACCAGCAGCGGGCAGTAGCGGGCTTTCTGTTCGGCAGTGGCGATGTCCGGCTTGCTGTCGAACAGGATGTACTCATAGGCCGACAAGCCACGTACCACTACGCTGGACTTGCCCAACGCCTCAGCATCAACCGGCTTGTCGCCGTT  >  NC_002947/1051278‑1051568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.