New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 13314856 (0.100)3 (0.050) 3/250 NT 50.8% coding (710/1644 nt) PP_1157 acetolactate synthase
?NC_002947 3808957 = 0 (0.000)coding (742/1644 nt) PP_3365 acetolactate synthase

CGGACCATGAAGAACGGCGGCTTCTCGATCACATCGTGGCCGATGTTGATGATCAGGTCGGCGGCTTCGACGGCGCGGTGAACGAAGTCGCCCGACGACAGCGCAGCGTTGCCGAGGAAGCGCGGGTGGCGCTCGTCGACCACGCCTTTACCCATCTGGGTGGTGATGAACGGGATGCCGGTCTTGTCGATCAGCTGCTTGAGGACCTTGGCGGTCATCTTGCGGTTGGCACCGGCACCGATCACCAGGATCGGGT  >  NC_002947/3808848‑3809103
                                                                                                             |                                                                                                                                                  
tcctggtgatcggtgccggtgccaaccgcaagatgaccgccaaggtcctcaagcagctgatcgacaagaccggcatcccgttcatcaccacccagatgggtaaaggcgtTGCCGAGGAAGCGCGGGTGGCGCTCGTCGACCACGCCtt                                                                                                              >  2:339789‑M2/110‑148 (MQ=255)
  ctggtgatcggtgccggtgccaaccgcaagatgaccgccaaggtcctcaagcagctgatcgacaagaccggcatcccgttcatcaccacccagatgggtaaaggcgtTGCCGAGGAAGCGCGGGTGGCGCTCGTCGACCACGCCTTTa                                                                                                            <  5:175784‑M2/41‑1 (MQ=255)
     gtgatcggtgccggtgccaaccgcaagatgaccgccaaggtcctcaagcagctgatcgacaagaccggcatcccgttcatcaccacccagatgggtaaaggcgtTGCCGAGGAAGCGCGGGTGGCGCTCGTCGACCACGCCTTTAcc                                                                                                          <  1:339789‑M2/43‑1 (MQ=255)
                                                                                                           gtTGCCGAGGAAGCGCGGGTGGCGCTCGTCGACCACGCCTTTACCCATCTGGGTGGTGATGAACGGGATGCCGGTCTTGTCGATCAGCTGCTTGAGGACCTTGGCGGTCATCTTGCGGTTGGCACCGGCACCGATCACCAGGATCGGGt  >  8:143578‑M2/3‑149 (MQ=255)
                                                                                                             |                                                                                                                                                  
CGGACCATGAAGAACGGCGGCTTCTCGATCACATCGTGGCCGATGTTGATGATCAGGTCGGCGGCTTCGACGGCGCGGTGAACGAAGTCGCCCGACGACAGCGCAGCGTTGCCGAGGAAGCGCGGGTGGCGCTCGTCGACCACGCCTTTACCCATCTGGGTGGTGATGAACGGGATGCCGGTCTTGTCGATCAGCTGCTTGAGGACCTTGGCGGTCATCTTGCGGTTGGCACCGGCACCGATCACCAGGATCGGGT  >  NC_002947/3808848‑3809103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.