New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3912159	62 (1.050)	3 (0.050)	3/248	NT	5.1%	coding (505/1092 nt)	PP_3452	GGDEF domain‑containing protein
	?	NC_002947	= 3912189	51 (0.900)					coding (535/1092 nt)	PP_3452	GGDEF domain‑containing protein

CTACCGGTGCGGCGCTGGTCATTCTTCTGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAGGCCGACCGCCAGCTGCGGA  >  NC_002947/3912048‑3912336                                                                                                                                              |                                                                                                                                                    cTACCGGTGCGGCGCTGGTCATTCTTCTGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTcagcta                                                                                                                                              >  7:217114/1‑149 (MQ=255)                  gTCATTCTTCTGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATcc                                                                                                                             >  8:109945/1‑149 (MQ=255)                     aTTCTTCTGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGc                                                                                                                           <  7:109945/148‑1 (MQ=255)                     aTTCTTCTGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGc                                                                                                                           >  7:257886/1‑148 (MQ=255)                      ttcttcTGCGCCATGGTCATCAGCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGc                                                                                                                           >  7:236423/1‑147 (MQ=255)                      ttcttcTGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCTCATCGATTTTTTTGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCaa                                                                                                                         <  1:304292/149‑1 (MQ=255)                      ctcttctGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCaa                                                                                                                         <  4:298292/148‑1 (MQ=255)                         ttctGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAgg                                                                                                                       >  8:126391/1‑148 (MQ=255)                                 cATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTg                                                                                                               >  2:176572/1‑148 (MQ=255)                                      tcatcaCCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAAt                                                                                                         >  2:234338/1‑149 (MQ=255)                                         tcaCCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTc                                                                                                      >  5:201156/1‑149 (MQ=255)                                          caCCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTc                                                                                                      >  8:281422/1‑148 (MQ=255)                                            ccTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTAc                                                                                                   <  6:169288/149‑1 (MQ=255)                                            ccTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTAc                                                                                                   <  8:182610/149‑1 (MQ=255)                                                    aTGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCaa                                                                                           <  8:236423/149‑1 (MQ=255)                                                     tGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAg                                                                                          <  7:126391/149‑1 (MQ=255)                                                       cTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGgt                                                                                        >  8:239917/1‑149 (MQ=255)                                                       cTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGgt                                                                                        >  7:95396/1‑149 (MQ=255)                                                          aaTCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGgtgt                                                                                      <  7:239917/148‑1 (MQ=255)                                                           aTCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTg                                                                                    <  1:234338/149‑1 (MQ=255)                                                            tCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGc                                                                                   >  8:331832/1‑149 (MQ=255)                                                             ccGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTcagctacagc                                                                                                                                          >  6:103102/1‑93 (MQ=255)                                                              cGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTg                                                                                 <  7:281422/149‑1 (MQ=255)                                                               gTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGc                                                                                                              >  2:90249/1‑119 (MQ=255)                                                               gTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGc                                                                                                              <  1:90249/119‑1 (MQ=255)                                                                    aCCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGa                                                                               >  2:329458/1‑145 (MQ=255)                                                                    aCCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGa                                                                               <  1:329458/145‑1 (MQ=255)                                                                       acacCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGcc                                                                        <  7:119493/149‑1 (MQ=255)                                                                        cacCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCt                                                                       <  2:120738/149‑1 (MQ=255)                                                                            cGCTTCGAGCGCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGTTGTTGCTGGAGCAAGCCTACGt                                                                   <  6:334089/149‑1 (MQ=255)                                                                            cGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGt                                                                   <  1:176572/149‑1 (MQ=255)                                                                              cATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAAttt                                                                                                       >  1:121996/1‑111 (MQ=255)                                                                              cATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAAttt                                                                                                       <  2:121996/111‑1 (MQ=255)                                                                                   aGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGcc                                                            >  4:96499/1‑149 (MQ=255)                                                                                        gATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGAc                                                       <  8:101893/149‑1 (MQ=255)                                                                                            cgcTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGAc                                                   <  4:257531/149‑1 (MQ=255)                                                                                             gcTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACa                                                  >  1:256077/1‑149 (MQ=255)                                                                                                 gAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTc                                               <  8:257886/148‑1 (MQ=255)                                                                                                    ggCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAATGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCaa                                           <  6:201156/149‑1 (MQ=255)                                                                                                     gcgcCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAAc                                          >  5:60962/1‑149 (MQ=255)                                                                                                     gcgcCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAAc                                          <  3:96499/149‑1 (MQ=255)                                                                                                         cATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGtcagcatggcgccttcgagcgcatcgggctcgatgcgggtgtggtagaacggattaagcatcacccaggtgatgaccatggcgcagaagaatgaccagcgccgcaccgg                                        <  2:270292‑M2/147‑110 (MQ=255)                                                                                                            gCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCt                                   >  5:247620/1‑149 (MQ=255)                                                                                                                aTCAGCTATGCCGTGTTTCTAAGCGGCCTGGtcagcatggcgccttcgagcgcatcgggctcga                                                                                                                    >  6:165724‑M2/1‑31 (MQ=255)                                                                                                                aTCAGCTATGCCGTGTTTCTAAGCGGCCTGGtcagcatggcgccttcgagcgcatcgggctcga                                                                                                                    <  5:165724‑M2/64‑34 (MQ=255)                                                                                                                   aGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAg                                                                          >  2:277418/1‑103 (MQ=255)                                                                                                                   aGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAg                                                                          <  1:277418/103‑1 (MQ=255)                                                                                                                    gCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATg                           <  2:256077/149‑1 (MQ=255)                                                                                                                     cTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATgg                          <  7:331832/149‑1 (MQ=255)                                                                                                                     cTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATgg                          <  8:217114/149‑1 (MQ=255)                                                                                                                          ccGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAg                     >  5:200741/1‑149 (MQ=255)                                                                                                                           cGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAgg                    >  5:171370/1‑149 (MQ=255)                                                                                                                            gtgtTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATg                           <  3:255961/141‑1 (MQ=255)                                                                                                                            gtgtTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAGGc                   <  6:60962/149‑1 (MQ=255)                                                                                                                            gtgtTTCTAAGCGGCCTGGTCAGCTACAGCTACATGCAGATCCGCAACGCCAAGCTCCACAAATTCTACCTGTCAAACGTGTTGATCGAGCAAGCCTACGTCGATGCCCTGACAGACATTCCAAACCGCCGCTCCTTCATgtagatcg                    >  4:255961/1‑141 (MQ=255)                                                                                                                                          ccTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAGGCCGACCGCCAGCTGc     >  8:209978/1‑149 (MQ=255)                                                                                                                                           cTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAGGCCGACCGCCAGCTGCg    <  7:276219/149‑1 (MQ=255)                                                                                                                                            tGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGCCCGACATTCCCAACCGCCGCTCGTTCATGGCCCAGGCCGACCGCCAGCTGCg    >  4:203642/1‑148 (MQ=255)                                                                                                                                              gTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAGGc                   <  4:257464/131‑1 (MQ=255)                                                                                                                                              gTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAGGCCGACCGCCAGCTGCGGa  <  8:95396/148‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                    CTACCGGTGCGGCGCTGGTCATTCTTCTGCGCCATGGTCATCACCTGGGTGATGCTTAATCCGTTCTACCACACCCGCATCGAGCCCGATGCGCTCGAAGGCGCCATGCTGATCAGCTATGCCGTGTTTCTAAGCGGCCTGGTCAGCTACAGCTACCTGCAGATCCGCAAGGCCAAGCTGCACAATTTCTACCTGTCCAAGGTGTTGCTGGAGCAAGCCTACGTCGATGCCCTGACCGACATTCCCAACCGCCGCTCGTTCATGGCCCAGGCCGACCGCCAGCTGCGGA  >  NC_002947/3912048‑3912336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.