New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4533579	52 (0.880)	5 (0.090)	5/234	NT	10.7%	intergenic (+21/‑153)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
	?	NC_002947	= 4533644	36 (0.670)					intergenic (+86/‑88)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase

TGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGC  >  NC_002947/4533500‑4533791                                                                                                                                                 |                                                                                                                                                    tggctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcaca                                                                                                                                                 <  2:106845‑M2/149‑5 (MQ=255)    ctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcacaggc                                                                                                                                              >  1:149871‑M2/1‑142 (MQ=255)              ggAAGCGGCGGCATAGGCGTGGTACCGCATGCGCTACGGTTTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGAGCTCACAGTGTTGGAGCGGGTTCACCTGCGAAGAGGCCAACACAGGCAACACAACt                                                                                                                                     <  8:295370/148‑1 (MQ=255)                    tGCGGCAAAGGCCTGGTACCGCATGCGCGACGGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTTAAAGGGACCTCACATTGTAGGAGCGGGTTCACCTGCTAAGAGGCCCACACAGGCAACACAACTTCCTGAt                                                                                                                              <  4:367635/149‑1 (MQ=255)                       ggCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATAcc                                                                                                                           <  3:231538/149‑1 (MQ=255)                        gCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATAccc                                                                                                                          <  8:273578/149‑1 (MQ=255)                               ccTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCaaaa                                                                                                                   <  6:335788/149‑1 (MQ=255)                                      ccGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCTAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctc                                                                                                             <  5:129194/148‑1 (MQ=255)                                                gACCGTGTCTGAAGGGCATCAGTGTTGCCAGTGCGGGCCACATAGCGGGTGAAAAGGAACACACACTGTATGAGAGGGTTAACCAGCGAAGAGGCCCCCACAAGCAACACAACAAACAGATAACCGCCAAAAAAACACCTATTCTaaa                                                                                                   >  6:291765/1‑148 (MQ=255)                                                 aCCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATa                                                                                                 <  2:262768/149‑1 (MQ=255)                                                 aCCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATa                                                                                                 <  5:77350/149‑1 (MQ=255)                                                     tgtCTGAAGGGCATCAGTGTTGCCAGTGCGGGCCTCGTCGCGGGGGAAACGGACCACACAGTGTAGGAGCGGGGTCACCAGCGAAGAGGCCCACACACGCACCCCAACATCCTGATACCCCCCAAAATCCCACCTATTATCaaaaacac                                                                                             >  8:263001/1‑143 (MQ=255)                                                                 aTCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGTGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCt                                                                                 <  5:291765/149‑1 (MQ=255)                                                                 aTCAGTGTTGCCTGGGCGGGCCGCTTCGCGGGTTAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCt                                                                                 <  2:350660/149‑1 (MQ=255)                                                                 aTCAGTGTTGCCGGGGCGGGCCTCTTCGCGGGTGAACGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCTAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCt                                                                                 <  2:345051/149‑1 (MQ=255)                                                                       gtTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCAcc                                                                            >  2:284609/1‑148 (MQ=255)                                                                       gtTGCCTGTGCGGGCCTCTTAGCGGGTGAAAGGGACCACACACTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCCCACAGCCAACACAACTTACAGAAAACCGCCAAAAACACACCTATTCTAAATATCTCCCATAGCTTACAGCAcc                                                                            >  2:367687/1‑148 (MQ=255)                                                                           ccTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGga                                                                       <  1:106845/149‑1 (MQ=255)                                                                                      ctctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgc                                                            <  8:100871‑M2/149‑90 (MQ=255)                                                                                      ctctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAt                                                            <  7:263001/149‑1 (MQ=255)                                                                                      ctctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAt                                                            <  1:284609/149‑1 (MQ=255)                                                                                        ctTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAt                                                            >  8:235197/1‑147 (MQ=255)                                                                                         ttCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcacaggcaacactgatgcccttcagacaccgtcccgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgc                                                         <  5:243044‑M2/149‑93 (MQ=255)                                                                                           cgcgGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgccg                                                       <  3:188583‑M2/149‑95 (MQ=255)                                                                                             cgGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgccggg                                                     >  7:100871‑M2/1‑53 (MQ=255)                                                                                             cgGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTAt                                                     >  5:357747/1‑149 (MQ=255)                                                                                                  gAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGa                                                                >  8:42959/1‑133 (MQ=255)                                                                                                  gAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGa                                                                <  7:42959/133‑1 (MQ=255)                                                                                                     aGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCAc                                             >  1:196288/1‑149 (MQ=255)                                                                                                     aGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCAc                                             <  6:357747/149‑1 (MQ=255)                                                                                                          ccTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAg                                         >  7:7526/1‑148 (MQ=255)                                                                                                           cTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGa                                       >  3:155996/1‑149 (MQ=255)                                                                                                            tCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGAc                                      >  6:299850/1‑149 (MQ=255)                                                                                                            tCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCAAAAATCCCTACTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAgc                                        >  1:321113/1‑146 (MQ=255)                                                                                                              acaGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACgg                                    >  6:169571/1‑149 (MQ=255)                                                                                                                 gtgtAGGAGCGGGTTCACCTGCGAAGAGGCCCAcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagcaggtcgccgccggggaagcggccgttgtcgatgc                                 >  4:188583‑M2/1‑33 (MQ=255)                                                                                                                     aGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAt                                                            <  7:328344/118‑1 (MQ=255)                                                                                                                     aGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCAt                                                            >  8:328344/1‑118 (MQ=255)                                                                                                                       gAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGa                                       <  4:310115/137‑1 (MQ=255)                                                                                                                       gAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGa                                       >  3:310115/1‑137 (MQ=255)                                                                                                                           gggTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGAtcttc                       <  8:7526/149‑1 (MQ=255)                                                                                                                            ggTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGAtcttct                      <  5:299850/149‑1 (MQ=255)                                                                                                                                 aCCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAg                 >  8:235131/1‑149 (MQ=255)                                                                                                                                         agagGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGCAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTgggg         >  2:163322/1‑149 (MQ=255)                                                                                                                                             gCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCATATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGCCCATGAGCTATGTAACCACGAAGGCAGGCGTACAGATCTGCTCCAAGGACTGGGGCCcg     >  8:135997/1‑149 (MQ=255)                                                                                                                                               ccACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGCAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCcgcg   >  4:60608/1‑149 (MQ=255)                                                                                                                                                cacacaGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTCCTACAAGGACTGGGGCCcgcgc  <  7:235197/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    TGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGC  >  NC_002947/4533500‑4533791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.