| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4626524 = | NA (NA) | 13 (0.220) | 5/258 | NT | NA | coding (980/1533 nt) | PP_4091 | transposase |
| ? | NC_002947 | 4626581 = | NA (NA) | coding (923/1533 nt) | PP_4091 | transposase | |||||
GTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAA > NC_002947/4626438‑4626669 | gTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCACTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCg > 6:344242/1‑149 (MQ=21) ttgATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAat > 7:206307/1‑148 (MQ=34) atgatggTCAGCTCAACTTCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCGGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGGTGTAGCGCCAACGCGTTGTAACCGGCGTAatcatc < 5:275742/143‑1 (MQ=11) atcatcGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAatcat < 6:337954/148‑1 (MQ=34) gTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGtcat > 8:38059/1‑149 (MQ=34) gcgcAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACg > 3:325827/1‑149 (MQ=34) aaCATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAAc > 7:304005/1‑149 (MQ=34) aTCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACcgc < 4:83260/149‑1 (MQ=34) tCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACcgc > 5:218692/1‑148 (MQ=34) tCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACcgc > 3:344918/1‑148 (MQ=34) ggCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGa > 2:317163/1‑148 (MQ=34) gACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGccc > 4:312247/1‑149 (MQ=34) ccGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATa < 8:325485/143‑1 (MQ=34) ccGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATa > 7:325485/1‑143 (MQ=34) ccGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTc < 7:38059/149‑1 (MQ=34) tCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCcag > 5:69423/1‑148 (MQ=32) gCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGtcatc < 1:354173/121‑1 (MQ=32) gCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGtcatc > 2:354173/1‑121 (MQ=32) gCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCcagcag < 4:325827/147‑1 (MQ=32) gCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgc > 5:370252/1‑149 (MQ=32) cccTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcg > 6:248848/1‑149 (MQ=32) ccTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcgc < 4:126144/149‑1 (MQ=32) ccTTAGGCTACACCTTCTGCGCTTCGACGAATTTACGCCGAACATGTGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcg > 7:283828/1‑148 (MQ=17) cTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcg > 6:351023/1‑147 (MQ=32) cTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCAcctcct < 8:198584/149‑1 (MQ=32) cTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCAcctcct > 5:227898/1‑149 (MQ=32) cTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCAcctcct > 7:272314/1‑149 (MQ=32) ttCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTg > 3:59537/1‑149 (MQ=32) cTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTgc < 5:248848/148‑1 (MQ=32) cTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTgc < 8:206307/148‑1 (MQ=32) cgcTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTgcgc < 3:138906/147‑1 (MQ=32) gcTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGcgcgcg > 4:315372/1‑149 (MQ=32) cgacgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCt < 6:232150/148‑1 (MQ=32) gacgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtgg < 3:230617/149‑1 (MQ=32) gacgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtgg > 4:230617/1‑149 (MQ=32) acgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggt < 8:304005/149‑1 (MQ=32) cgaATTTACGCCGAACATGTGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggtg < 8:283828/149‑1 (MQ=17) cgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggtg < 5:151924/149‑1 (MQ=32) gaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCGCCGGCTGTAGCGCCAACGCGTTGTACCCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCgg > 1:262615/1‑127 (MQ=12) gaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCgg < 2:262615/126‑1 (MQ=32) cGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAAt < 4:344918/148‑1 (MQ=32) cGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAAt < 4:59537/148‑1 (MQ=32) gCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTggtggt < 3:205720/142‑1 (MQ=32) gCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTggtggt < 1:98965/142‑1 (MQ=32) gCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTggtggt > 4:205720/1‑142 (MQ=32) gCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTggtggt > 2:98965/1‑142 (MQ=32) ccGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGa < 3:312247/149‑1 (MQ=32) aaCATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGaa > 8:129549/1‑147 (MQ=11) | GTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGC‑CCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAA > NC_002947/4626438‑4626669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |